RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 CHRNDQ07001 517 aa28.14■■■□□ 2.1
SCARB1-206ENST00000539320 CYP4F22Q6NT55 531 aa28.14■■■□□ 2.1
SCARB1-206ENST00000539320 DCPSQ96C86 337 aaKnown RBP28.14■■■□□ 2.1
SCARB1-206ENST00000539320 COA1Q9GZY4 146 aa28.14■■■□□ 2.1
SCARB1-206ENST00000539320 GGA3Q9NZ52 723 aa28.14■■■□□ 2.1
SCARB1-206ENST00000539320 KCNJ4P48050 445 aa28.13■■■□□ 2.09
SCARB1-206ENST00000539320 GRM1Q13255 1194 aa28.13■■■□□ 2.09
SCARB1-206ENST00000539320 TNS4Q8IZW8 715 aa28.13■■■□□ 2.09
SCARB1-206ENST00000539320 C9orf78Q9NZ63 289 aaPredicted RBP28.13■■■□□ 2.09
SCARB1-206ENST00000539320 KLRK1P26718 216 aa28.12■■■□□ 2.09
SCARB1-206ENST00000539320 CTCFP49711 727 aaPredicted RBP28.12■■■□□ 2.09
SCARB1-206ENST00000539320 MAP2K1Q02750 393 aaPredicted RBP28.12■■■□□ 2.09
SCARB1-206ENST00000539320 EPHA10Q5JZY3 1008 aa28.12■■■□□ 2.09
SCARB1-206ENST00000539320 LMBR1LQ6UX01 489 aa28.12■■■□□ 2.09
SCARB1-206ENST00000539320 TXNRD3Q86VQ6 643 aa28.12■■■□□ 2.09
SCARB1-206ENST00000539320 ZNF646O15015 1829 aaPredicted RBP28.12■■■□□ 2.09
SCARB1-206ENST00000539320 A0A1B0GUL6 1792 aa28.11■■■□□ 2.09
SCARB1-206ENST00000539320 POLR2AP24928 1970 aaKnown RBP28.11■■■□□ 2.09
SCARB1-206ENST00000539320 ADM5C9JUS6 153 aa28.11■■■□□ 2.09
SCARB1-206ENST00000539320 USP17L8P0C7I0 530 aa28.11■■■□□ 2.09
SCARB1-206ENST00000539320 MRPL50Q8N5N7 158 aaKnown RBP28.11■■■□□ 2.09
SCARB1-206ENST00000539320 HHIPL1Q96JK4 782 aa28.11■■■□□ 2.09
SCARB1-206ENST00000539320 SLFN5Q08AF3 891 aa28.1■■■□□ 2.09
SCARB1-206ENST00000539320 DACT2Q5SW24 774 aa28.1■■■□□ 2.09
SCARB1-206ENST00000539320 FBXW7Q969H0 707 aa28.1■■■□□ 2.09
SCARB1-206ENST00000539320 ASTN2O75129 1339 aaPredicted RBP28.1■■■□□ 2.09
SCARB1-206ENST00000539320 STRIP1Q5VSL9 837 aa28.09■■■□□ 2.09
SCARB1-206ENST00000539320 DLK2Q6UY11 383 aa28.09■■■□□ 2.09
SCARB1-206ENST00000539320 SULF1Q8IWU6 871 aa28.09■■■□□ 2.09
SCARB1-206ENST00000539320 MYOZ2Q9NPC6 264 aa28.09■■■□□ 2.09
SCARB1-206ENST00000539320 MYO3BQ8WXR4 1341 aa28.09■■■□□ 2.09
SCARB1-206ENST00000539320 CCDC57Q2TAC2 916 aa28.08■■■□□ 2.09
SCARB1-206ENST00000539320 TAF7LQ5H9L4 462 aa28.08■■■□□ 2.09
SCARB1-206ENST00000539320 PRDM10Q9NQV6 1147 aa28.08■■■□□ 2.09
SCARB1-206ENST00000539320 PTPRCP08575 1304 aa28.08■■■□□ 2.09
SCARB1-206ENST00000539320 CCER2I3L3R5 266 aa28.07■■■□□ 2.08
SCARB1-206ENST00000539320 SCARF1Q14162 830 aa28.07■■■□□ 2.08
SCARB1-206ENST00000539320 MXD3Q9BW11 206 aa28.07■■■□□ 2.08
SCARB1-206ENST00000539320 SSH1Q8WYL5 1049 aa28.06■■■□□ 2.08
SCARB1-206ENST00000539320 SUCLG2Q96I99 432 aa28.06■■■□□ 2.08
SCARB1-206ENST00000539320 TAF5LO75529 589 aa28.05■■■□□ 2.08
SCARB1-206ENST00000539320 HUNKP57058 714 aa28.05■■■□□ 2.08
SCARB1-206ENST00000539320 ANGEL2Q5VTE6 544 aaKnown RBP28.05■■■□□ 2.08
SCARB1-206ENST00000539320 HELBQ8NG08 1087 aaPredicted RBP28.05■■■□□ 2.08
SCARB1-206ENST00000539320 ZNF594Q96JF6 807 aaPredicted RBP28.05■■■□□ 2.08
SCARB1-206ENST00000539320 GBA2Q9HCG7 927 aaPredicted RBP28.05■■■□□ 2.08
SCARB1-206ENST00000539320 IRS2Q9Y4H2 1338 aa28.05■■■□□ 2.08
SCARB1-206ENST00000539320 UTYO14607 1347 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 PITPNM2Q9BZ72 1349 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 SNAP23O00161 211 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 AOC2O75106 756 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 MAP2K2P36507 400 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 C15orf52Q6ZUT6 534 aaKnown RBP28.04■■■□□ 2.08
SCARB1-206ENST00000539320 CNNM1Q9NRU3 951 aa28.04■■■□□ 2.08
SCARB1-206ENST00000539320 HSPA8P11142 646 aaKnown RBP28.03■■■□□ 2.08
SCARB1-206ENST00000539320 LDHAL6AQ6ZMR3 332 aa28.03■■■□□ 2.08
SCARB1-206ENST00000539320 OGFOD1Q8N543 542 aa28.03■■■□□ 2.08
SCARB1-206ENST00000539320 CDCA5Q96FF9 252 aa28.03■■■□□ 2.08
SCARB1-206ENST00000539320 CDCA7LQ96GN5 454 aa28.03■■■□□ 2.08
SCARB1-206ENST00000539320 NBPF7P0C2Y1 421 aaPredicted RBP28.02■■■□□ 2.08
SCARB1-206ENST00000539320 LBX1P52954 281 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 TTLL5Q6EMB2 1281 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 C2orf69Q8N8R5 385 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 KAZALD1Q96I82 304 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 BEGAINQ9BUH8 593 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 CD209Q9NNX6 404 aa28.02■■■□□ 2.08
SCARB1-206ENST00000539320 GTF2IP78347 998 aa28.01■■■□□ 2.07
SCARB1-206ENST00000539320 ALDH1L2Q3SY69 923 aa28.01■■■□□ 2.07
SCARB1-206ENST00000539320 ZNF804AQ7Z570 1209 aa28■■■□□ 2.07
SCARB1-206ENST00000539320 MMP14P50281 582 aa27.99■■■□□ 2.07
SCARB1-206ENST00000539320 SMC4Q9NTJ3 1288 aa27.99■■■□□ 2.07
SCARB1-206ENST00000539320 NOGQ13253 232 aa27.98■■■□□ 2.07
SCARB1-206ENST00000539320 NBPF9Q3BBW0 867 aa27.98■■■□□ 2.07
SCARB1-206ENST00000539320 KIAA0825Q8IV33 1275 aa27.98■■■□□ 2.07
SCARB1-206ENST00000539320 TRMT2AQ8IZ69 625 aaKnown RBP27.98■■■□□ 2.07
SCARB1-206ENST00000539320 BICC1Q9H694 974 aaKnown RBP27.98■■■□□ 2.07
SCARB1-206ENST00000539320 HDAC9Q9UKV0 1011 aa27.98■■■□□ 2.07
SCARB1-206ENST00000539320 PLIN1O60240 522 aa27.97■■■□□ 2.07
SCARB1-206ENST00000539320 BRPF1P55201 1214 aaPredicted RBP27.97■■■□□ 2.07
SCARB1-206ENST00000539320 RABL6Q3YEC7 729 aaPredicted RBP27.97■■■□□ 2.07
SCARB1-206ENST00000539320 RGMBQ6NW40 437 aa27.97■■■□□ 2.07
SCARB1-206ENST00000539320 PAPPA2Q9BXP8 1791 aa27.96■■■□□ 2.07
SCARB1-206ENST00000539320 WNT10BO00744 389 aa27.96■■■□□ 2.07
SCARB1-206ENST00000539320 SASH1O94885 1247 aa27.96■■■□□ 2.07
SCARB1-206ENST00000539320 CT47B1P0C2W7 299 aaPredicted RBP27.96■■■□□ 2.07
SCARB1-206ENST00000539320 IL1R1P14778 569 aa27.95■■■□□ 2.06
SCARB1-206ENST00000539320 ANKRD44Q8N8A2 993 aa27.95■■■□□ 2.06
SCARB1-206ENST00000539320 CAPN15O75808 1086 aa27.94■■■□□ 2.06
SCARB1-206ENST00000539320 PUS3Q9BZE2 481 aaKnown RBP27.94■■■□□ 2.06
SCARB1-206ENST00000539320 CA12O43570 354 aa27.93■■■□□ 2.06
SCARB1-206ENST00000539320 UBE4AQ14139 1066 aa27.93■■■□□ 2.06
SCARB1-206ENST00000539320 CERS5Q8N5B7 392 aa27.93■■■□□ 2.06
SCARB1-206ENST00000539320 SCAF8Q9UPN6 1271 aaKnown RBP27.93■■■□□ 2.06
SCARB1-206ENST00000539320 FAM155AB1AL88 458 aaPredicted RBP27.92■■■□□ 2.06
SCARB1-206ENST00000539320 ZNF157P51786 506 aaPredicted RBP27.92■■■□□ 2.06
SCARB1-206ENST00000539320 FKBP1BP68106 108 aa27.92■■■□□ 2.06
SCARB1-206ENST00000539320 MROH5Q6ZUA9 1318 aa27.92■■■□□ 2.06
SCARB1-206ENST00000539320 CCDC102AQ96A19 550 aa27.91■■■□□ 2.06
SCARB1-206ENST00000539320 ZBED3Q96IU2 234 aaPredicted RBP27.91■■■□□ 2.06
SCARB1-206ENST00000539320 ZIC5Q96T25 663 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms