RNA–Protein interactions for RNA: ENST00000539204.5

YBX3-207, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-207ENST00000539204 HSP90B1P14625 803 aaKnown RBP15.75■□□□□ 0.11
YBX3-207ENST00000539204 MMP14P50281 582 aa15.75■□□□□ 0.11
YBX3-207ENST00000539204 CEP290O15078 2479 aa15.74■□□□□ 0.11
YBX3-207ENST00000539204 IGF2BP3O00425 579 aaKnown RBP eCLIP15.74■□□□□ 0.11
YBX3-207ENST00000539204 ATP2B4P23634 1241 aa15.74■□□□□ 0.11
YBX3-207ENST00000539204 SP3Q02447 781 aa15.74■□□□□ 0.11
YBX3-207ENST00000539204 SLC4A8Q2Y0W8 1093 aa15.74■□□□□ 0.11
YBX3-207ENST00000539204 APOBEC3FQ8IUX4 373 aaKnown RBP15.74■□□□□ 0.11
YBX3-207ENST00000539204 ZNF333Q96JL9 665 aa15.74■□□□□ 0.11
YBX3-207ENST00000539204 XDHP47989 1333 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 TRIM28Q13263 835 aaKnown RBP15.73■□□□□ 0.11
YBX3-207ENST00000539204 CRHR2Q13324 411 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 ARHGEF6Q15052 776 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 CHRDL2Q6WN34 429 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 MXD3Q9BW11 206 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 A0A0C4DFX4 3053 aa15.73■□□□□ 0.11
YBX3-207ENST00000539204 MAPK8IP3Q9UPT6 1336 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 PPP1R12BO60237 982 aaPredicted RBP15.72■□□□□ 0.11
YBX3-207ENST00000539204 SLC9C1Q4G0N8 1177 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 CCDC152Q4G0S7 254 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 DACT2Q5SW24 774 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 FZD1Q9UP38 647 aa15.72■□□□□ 0.11
YBX3-207ENST00000539204 MYO3BQ8WXR4 1341 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 DLG5Q8TDM6 1919 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 UNCXA6NJT0 531 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 SASH1O94885 1247 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 MAP3K11Q16584 847 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 STRIP1Q5VSL9 837 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 ZBTB38Q8NAP3 1195 aaPredicted RBP15.71■□□□□ 0.11
YBX3-207ENST00000539204 WNK4Q96J92 1243 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 CHPF2Q9P2E5 772 aa15.71■□□□□ 0.11
YBX3-207ENST00000539204 RBBP6Q7Z6E9 1792 aaKnown RBP15.7■□□□□ 0.1
YBX3-207ENST00000539204 RIPK4P57078 832 aa15.7■□□□□ 0.1
YBX3-207ENST00000539204 ANKRD18AQ8IVF6 992 aa15.7■□□□□ 0.1
YBX3-207ENST00000539204 CLMNQ96JQ2 1002 aa15.7■□□□□ 0.1
YBX3-207ENST00000539204 DEFB129Q9H1M3 183 aa15.7■□□□□ 0.1
YBX3-207ENST00000539204 COL4A1P02462 1669 aa15.7■□□□□ 0.1
YBX3-207ENST00000539204 DPF3Q92784 378 aa15.69■□□□□ 0.1
YBX3-207ENST00000539204 RBM27Q9P2N5 1060 aaKnown RBP15.69■□□□□ 0.1
YBX3-207ENST00000539204 SUPT20HL1Q3ZLR7 823 aa15.68■□□□□ 0.1
YBX3-207ENST00000539204 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
YBX3-207ENST00000539204 CCDC85AQ96PX6 553 aaPredicted RBP15.68■□□□□ 0.1
YBX3-207ENST00000539204 PTPN18Q99952 460 aa15.68■□□□□ 0.1
YBX3-207ENST00000539204 DBF4Q9UBU7 674 aaPredicted RBP15.68■□□□□ 0.1
YBX3-207ENST00000539204 RANBP2P49792 3224 aaKnown RBP15.67■□□□□ 0.1
YBX3-207ENST00000539204 WTIPA6NIX2 430 aaPredicted RBP15.67■□□□□ 0.1
YBX3-207ENST00000539204 PDE8AO60658 829 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 MYCP01106 439 aaPredicted RBP15.67■□□□□ 0.1
YBX3-207ENST00000539204 CAP1Q01518 475 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 HDGFL1Q5TGJ6 251 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 KIAA0825Q8IV33 1275 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 HYPKQ9NX55 129 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 PTCH2Q9Y6C5 1203 aa15.67■□□□□ 0.1
YBX3-207ENST00000539204 TESPA1A2RU30 521 aaPredicted RBP15.66■□□□□ 0.1
YBX3-207ENST00000539204 IREB2P48200 963 aaKnown RBP15.66■□□□□ 0.1
YBX3-207ENST00000539204 KRT24Q2M2I5 525 aa15.66■□□□□ 0.1
YBX3-207ENST00000539204 RIC3Q7Z5B4 369 aa15.66■□□□□ 0.1
YBX3-207ENST00000539204 ZBED3Q96IU2 234 aaPredicted RBP15.66■□□□□ 0.1
YBX3-207ENST00000539204 MED23Q9ULK4 1368 aa15.65■□□□□ 0.1
YBX3-207ENST00000539204 DLGAP5Q15398 846 aa15.65■□□□□ 0.1
YBX3-207ENST00000539204 MINPP1Q9UNW1 487 aa15.65■□□□□ 0.1
YBX3-207ENST00000539204 PPP2R3BQ9Y5P8 575 aa15.65■□□□□ 0.1
YBX3-207ENST00000539204 PSME4Q14997 1843 aa15.65■□□□□ 0.1
YBX3-207ENST00000539204 CHL1O00533 1208 aa15.64■□□□□ 0.09
YBX3-207ENST00000539204 USP2O75604 605 aaPredicted RBP15.64■□□□□ 0.09
YBX3-207ENST00000539204 PCCAP05165 728 aaPredicted RBP15.64■□□□□ 0.09
YBX3-207ENST00000539204 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
YBX3-207ENST00000539204 LMOD3Q0VAK6 560 aa15.64■□□□□ 0.09
YBX3-207ENST00000539204 ANKRD13AQ8IZ07 590 aa15.64■□□□□ 0.09
YBX3-207ENST00000539204 CDC5LQ99459 802 aaKnown RBP15.64■□□□□ 0.09
YBX3-207ENST00000539204 ZFYVE28Q9HCC9 887 aa15.64■□□□□ 0.09
YBX3-207ENST00000539204 BSDC1Q9NW68 430 aaPredicted RBP15.64■□□□□ 0.09
YBX3-207ENST00000539204 GJA5P36382 358 aa15.63■□□□□ 0.09
YBX3-207ENST00000539204 CCDC191Q8NCU4 936 aa15.63■□□□□ 0.09
YBX3-207ENST00000539204 SH3TC2Q8TF17 1288 aa15.63■□□□□ 0.09
YBX3-207ENST00000539204 JARID2Q92833 1246 aaPredicted RBP15.63■□□□□ 0.09
YBX3-207ENST00000539204 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
YBX3-207ENST00000539204 COL6A3P12111 3177 aa15.63■□□□□ 0.09
YBX3-207ENST00000539204 COL1A1P02452 1464 aaPredicted RBP15.63■□□□□ 0.09
YBX3-207ENST00000539204 MYO1BO43795 1136 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 HOXB7P09629 217 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 GTF2IP78347 998 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 GOLGA2Q08379 1002 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 TAF1CQ15572 869 aaPredicted RBP15.62■□□□□ 0.09
YBX3-207ENST00000539204 NBPF12Q5TAG4 269 aaPredicted RBP15.62■□□□□ 0.09
YBX3-207ENST00000539204 TXNRD3Q86VQ6 643 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 CCER1Q8TC90 406 aaPredicted RBP15.62■□□□□ 0.09
YBX3-207ENST00000539204 MYD88Q99836 296 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 LEMD3Q9Y2U8 911 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 CUL9Q8IWT3 2517 aa15.62■□□□□ 0.09
YBX3-207ENST00000539204 WDHD1O75717 1129 aaPredicted RBP15.61■□□□□ 0.09
YBX3-207ENST00000539204 MNX1P50219 401 aaPredicted RBP15.61■□□□□ 0.09
YBX3-207ENST00000539204 KIF22Q14807 665 aa15.61■□□□□ 0.09
YBX3-207ENST00000539204 MTMR14Q8NCE2 650 aa15.61■□□□□ 0.09
YBX3-207ENST00000539204 OPTNQ96CV9 577 aa15.61■□□□□ 0.09
YBX3-207ENST00000539204 CWC25Q9NXE8 425 aaPredicted RBP15.61■□□□□ 0.09
YBX3-207ENST00000539204 NR2E3Q9Y5X4 410 aa15.61■□□□□ 0.09
YBX3-207ENST00000539204 TMPOP42166 694 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms