RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RPLP1P05386 114 aaKnown RBP10.92□□□□□ -0.66
CCDC7-209ENST00000539197 FSTP19883 344 aa10.92□□□□□ -0.66
CCDC7-209ENST00000539197 MPSTP25325 297 aa10.92□□□□□ -0.66
CCDC7-209ENST00000539197 CD68P34810 354 aaPredicted RBP10.92□□□□□ -0.66
CCDC7-209ENST00000539197 CCDC82Q8N4S0 544 aa10.92□□□□□ -0.66
CCDC7-209ENST00000539197 HHIPQ96QV1 700 aa10.92□□□□□ -0.66
CCDC7-209ENST00000539197 TMEM88BA6NKF7 163 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 FAM177BA6PVY3 158 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 FSCN2O14926 492 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 ADAM11O75078 769 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 FAM117BQ6P1L5 589 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 ACAD11Q709F0 780 aa10.91□□□□□ -0.66
CCDC7-209ENST00000539197 GTF3C2Q8WUA4 911 aaPredicted RBP10.91□□□□□ -0.66
CCDC7-209ENST00000539197 PDGFAP04085 211 aa10.9□□□□□ -0.66
CCDC7-209ENST00000539197 PTPRAP18433 802 aa10.9□□□□□ -0.66
CCDC7-209ENST00000539197 EIF1AXP47813 144 aaKnown RBP10.9□□□□□ -0.66
CCDC7-209ENST00000539197 C8orf34Q49A92 452 aa10.9□□□□□ -0.66
CCDC7-209ENST00000539197 UBASH3BQ8TF42 649 aa10.9□□□□□ -0.66
CCDC7-209ENST00000539197 SALL4Q9UJQ4 1053 aa10.9□□□□□ -0.66
CCDC7-209ENST00000539197 NFKBIEO00221 500 aa10.89□□□□□ -0.67
CCDC7-209ENST00000539197 NOM1Q5C9Z4 860 aaKnown RBP10.89□□□□□ -0.67
CCDC7-209ENST00000539197 KLHL23Q8NBE8 558 aa10.89□□□□□ -0.67
CCDC7-209ENST00000539197 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
CCDC7-209ENST00000539197 KLHDC7BQ96G42 594 aa10.89□□□□□ -0.67
CCDC7-209ENST00000539197 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
CCDC7-209ENST00000539197 PCSK2P16519 638 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 KIAA1211Q6ZU35 1233 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 ARMC10Q8N2F6 343 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 CEP41Q9BYV8 373 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 CHRDQ9H2X0 955 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 RAXQ9Y2V3 346 aa10.88□□□□□ -0.67
CCDC7-209ENST00000539197 CES1P23141 567 aa10.87□□□□□ -0.67
CCDC7-209ENST00000539197 SSFA2P28290 1259 aa10.87□□□□□ -0.67
CCDC7-209ENST00000539197 TTC16Q8NEE8 873 aa10.87□□□□□ -0.67
CCDC7-209ENST00000539197 ADAM19Q9H013 955 aa10.87□□□□□ -0.67
CCDC7-209ENST00000539197 HGSNATQ68CP4 663 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 XKR5Q6UX68 686 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 DZANK1Q9NVP4 752 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 STOML1Q9UBI4 398 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
CCDC7-209ENST00000539197 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.85□□□□□ -0.67
CCDC7-209ENST00000539197 GSC2O15499 205 aa10.85□□□□□ -0.67
CCDC7-209ENST00000539197 DHX15O43143 795 aaKnown RBP10.85□□□□□ -0.67
CCDC7-209ENST00000539197 DUOXA2Q1HG44 320 aa10.85□□□□□ -0.67
CCDC7-209ENST00000539197 KRTAP9-2Q9BYQ4 174 aa10.85□□□□□ -0.67
CCDC7-209ENST00000539197 SEC31BQ9NQW1 1179 aa10.85□□□□□ -0.67
CCDC7-209ENST00000539197 MZF1P28698 734 aaPredicted RBP10.84□□□□□ -0.67
CCDC7-209ENST00000539197 SSTR4P31391 388 aa10.84□□□□□ -0.67
CCDC7-209ENST00000539197 CABP4P57796 275 aa10.84□□□□□ -0.67
CCDC7-209ENST00000539197 PHLDB3Q6NSJ2 640 aa10.84□□□□□ -0.67
CCDC7-209ENST00000539197 PCMTD2Q9NV79 361 aa10.84□□□□□ -0.67
CCDC7-209ENST00000539197 UVSSAQ2YD98 709 aa10.83□□□□□ -0.68
CCDC7-209ENST00000539197 H3BRJ5 948 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 PDE2AO00408 941 aaPredicted RBP10.82□□□□□ -0.68
CCDC7-209ENST00000539197 EREGO14944 169 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 IGLV1-40P01703 118 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 NLRP12P59046 1061 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 WNT8BQ93098 351 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 PMEPA1Q969W9 287 aa10.82□□□□□ -0.68
CCDC7-209ENST00000539197 UTP4Q969X6 686 aaKnown RBP10.82□□□□□ -0.68
CCDC7-209ENST00000539197 MED26O95402 600 aa10.81□□□□□ -0.68
CCDC7-209ENST00000539197 PIP4K2BP78356 416 aa10.81□□□□□ -0.68
CCDC7-209ENST00000539197 FAM46AQ96IP4 442 aaKnown RBP10.81□□□□□ -0.68
CCDC7-209ENST00000539197 ANO2Q9NQ90 1003 aa10.81□□□□□ -0.68
CCDC7-209ENST00000539197 FOXD3Q9UJU5 478 aaPredicted RBP10.81□□□□□ -0.68
CCDC7-209ENST00000539197 KRTAP9-6A0A140TA67 174 aa10.8□□□□□ -0.68
CCDC7-209ENST00000539197 ALKBH2Q6NS38 261 aa10.8□□□□□ -0.68
CCDC7-209ENST00000539197 TNFRSF21O75509 655 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 TGFB1P01137 390 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 AAMPQ13685 434 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 TRIM42Q8IWZ5 723 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 OSMRQ99650 979 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 ZKSCAN3Q9BRR0 538 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 OSGEPQ9NPF4 335 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 SOX13Q9UN79 622 aa10.79□□□□□ -0.68
CCDC7-209ENST00000539197 HMX2A2RU54 273 aa10.78□□□□□ -0.68
CCDC7-209ENST00000539197 C7orf69Q9H7B7 122 aa10.78□□□□□ -0.68
CCDC7-209ENST00000539197 LATS2Q9NRM7 1088 aa10.78□□□□□ -0.68
CCDC7-209ENST00000539197 SART1O43290 800 aaKnown RBP10.77□□□□□ -0.69
CCDC7-209ENST00000539197 FZD6O60353 706 aa10.77□□□□□ -0.69
CCDC7-209ENST00000539197 NPR3P17342 541 aa10.77□□□□□ -0.69
CCDC7-209ENST00000539197 ZNF211Q13398 564 aaPredicted RBP10.77□□□□□ -0.69
CCDC7-209ENST00000539197 NXPE3Q969Y0 559 aa10.77□□□□□ -0.69
CCDC7-209ENST00000539197 CCDC87Q9NVE4 849 aa10.77□□□□□ -0.69
CCDC7-209ENST00000539197 PREPP48147 710 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 CD97P48960 835 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 ARL4DP49703 201 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 ANKRD34AQ69YU3 496 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 VN1R5Q7Z5H4 357 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 TMEM102Q8N9M5 508 aaPredicted RBP10.76□□□□□ -0.69
CCDC7-209ENST00000539197 MYRFLQ96LU7 910 aa10.76□□□□□ -0.69
CCDC7-209ENST00000539197 SOX1O00570 391 aaPredicted RBP10.75□□□□□ -0.69
CCDC7-209ENST00000539197 PHACTR2O75167 634 aa10.75□□□□□ -0.69
CCDC7-209ENST00000539197 ABL1P00519 1130 aa10.75□□□□□ -0.69
CCDC7-209ENST00000539197 NFIAQ12857 509 aa10.75□□□□□ -0.69
CCDC7-209ENST00000539197 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
CCDC7-209ENST00000539197 COBLO75128 1261 aa10.74□□□□□ -0.69
CCDC7-209ENST00000539197 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms