RNA–Protein interactions for RNA: ENST00000539191.1

NPIPB4-210, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 2

Gene NPIPB4, Length 305 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-210ENST00000539191 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
NPIPB4-210ENST00000539191 XDHP47989 1333 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 PI4KAP2A4QPH2 592 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 PDE8AO60658 829 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 HOXB7P09629 217 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 CTSWP56202 376 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 TRIM28Q13263 835 aaKnown RBP10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 UBE3BQ7Z3V4 1068 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 ANKRD18AQ8IVF6 992 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 PI4KAP1Q8N8J0 262 aa10.65□□□□□ -0.7
NPIPB4-210ENST00000539191 USP17L3A6NCW0 530 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 USP17L4A6NCW7 530 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 USP17L1Q7RTZ2 530 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 CCDC191Q8NCU4 936 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 HELBQ8NG08 1087 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 TTLL11Q8NHH1 800 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 CCDC102AQ96A19 550 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 PRKRIP1Q9H875 184 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 IFT57Q9NWB7 429 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 MINPP1Q9UNW1 487 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 SALL2Q9Y467 1007 aaPredicted RBP10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 OTOFQ9HC10 1997 aa10.64□□□□□ -0.71
NPIPB4-210ENST00000539191 ZSWIM8A7E2V4 1837 aa10.63□□□□□ -0.71
NPIPB4-210ENST00000539191 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
NPIPB4-210ENST00000539191 F8W031 263 aaPredicted RBP10.63□□□□□ -0.71
NPIPB4-210ENST00000539191 ZNF296Q8WUU4 475 aaPredicted RBP10.63□□□□□ -0.71
NPIPB4-210ENST00000539191 HPS5Q9UPZ3 1129 aa10.63□□□□□ -0.71
NPIPB4-210ENST00000539191 SSC5DA1L4H1 1573 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 WNT10BO00744 389 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 TAF5LO75529 589 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 CCT4P50991 539 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 GNAI1P63096 354 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 AGBL3Q8NEM8 1001 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 CLMNQ96JQ2 1002 aa10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 KIAA0100Q14667 2235 aaKnown RBP10.62□□□□□ -0.71
NPIPB4-210ENST00000539191 NEURL1BA8MQ27 555 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 ATP2B4P23634 1241 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 GTF2IP78347 998 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 KSR2Q6VAB6 950 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 CTU1Q7Z7A3 348 aaKnown RBP10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 CERS5Q8N5B7 392 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 MED23Q9ULK4 1368 aa10.61□□□□□ -0.71
NPIPB4-210ENST00000539191 CLRN2A0PK11 232 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 F6X3S4 739 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 ITGA6P23229 1130 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 CAP1Q01518 475 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 CDAN1Q8IWY9 1227 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 ZNF594Q96JF6 807 aaPredicted RBP10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 CEP290O15078 2479 aa10.6□□□□□ -0.71
NPIPB4-210ENST00000539191 ZNF609O15014 1411 aa10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 DDX58O95786 925 aaKnown RBP10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 SLC4A2P04920 1241 aa10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 PODNQ7Z5L7 613 aa10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 CDC5LQ99459 802 aaKnown RBP10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 BSDC1Q9NW68 430 aaPredicted RBP10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 HDAC9Q9UKV0 1011 aa10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 ANGEL1Q9UNK9 670 aaKnown RBP10.59□□□□□ -0.71
NPIPB4-210ENST00000539191 ZNF804BA4D1E1 1349 aa10.58□□□□□ -0.71
NPIPB4-210ENST00000539191 PLIN1O60240 522 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 ECM2O94769 699 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 CASP7P55210 303 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 CHRNDQ07001 517 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 EPHA10Q5JZY3 1008 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 TTLL5Q6EMB2 1281 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 CHMP3Q9Y3E7 222 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 SZT2Q5T011 3432 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 PITPNM2Q9BZ72 1349 aa10.58□□□□□ -0.72
NPIPB4-210ENST00000539191 H7C1W4 665 aa10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 GPR25O00155 361 aa10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 IGHMBP2P38935 993 aaKnown RBP10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 KCNJ4P48050 445 aa10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 GCKRQ14397 625 aa10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 IRS2Q9Y4H2 1338 aa10.57□□□□□ -0.72
NPIPB4-210ENST00000539191 CACNA1FO60840 1977 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 POTEFA5A3E0 1075 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 IGF2BP3O00425 579 aaKnown RBP eCLIP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 GJA5P36382 358 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 NEXNQ0ZGT2 675 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 FLIIQ13045 1269 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 FKBP5Q13451 457 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 GRIK5Q16478 980 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 NBPF12Q5TAG4 269 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 STRIP1Q5VSL9 837 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 OGFOD1Q8N543 542 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 CNKSR2Q8WXI2 1034 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 ZBED3Q96IU2 234 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 PRMT6Q96LA8 375 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 STK31Q9BXU1 1019 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 COA1Q9GZY4 146 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 VEZTQ9HBM0 779 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 SPINK5Q9NQ38 1064 aaPredicted RBP10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 FANCIQ9NVI1 1328 aa10.56□□□□□ -0.72
NPIPB4-210ENST00000539191 LAMB1P07942 1786 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms