RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, human

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPME1-205	ENST00000539021	UTY	O14607	1347 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	COL15A1	P39059	1388 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	ZNF609	O15014	1411 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	NEURL1B	A8MQ27	555 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	EPHA10	Q5JZY3	1008 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	STOX1	Q6ZVD7	989 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	NEUROD6	Q96NK8	337 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	OSBPL5	Q9H0X9	879 aa	Predicted RBP	10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	PCDHA7	Q9UN72	937 aa		10.14	□□□□□ -0.79
PPME1-205	ENST00000539021	GCKR	Q14397	625 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	DPCR1	Q3MIW9	517 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	CHST3	Q7LGC8	479 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	MNS1	Q8NEH6	495 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	CHMP4C	Q96CF2	233 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	NOL10	Q9BSC4	688 aa	Known RBP	10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	ST7	Q9NRC1	585 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	PHF8	Q9UPP1	1060 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	SLIT1	O75093	1534 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	XAGE3	Q8WTP9	111 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	MED1	Q15648	1581 aa	Predicted RBP	10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	GOLIM4	O00461	696 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	CTDNEP1	O95476	244 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	SLC3A2	P08195	630 aa	Known RBP	10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	PSME1	Q06323	249 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	ARHGAP29	Q52LW3	1261 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	E4F1	Q66K89	784 aa	Predicted RBP	10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	KIAA1468	Q9P260	1216 aa		10.13	□□□□□ -0.79
PPME1-205	ENST00000539021	POLR3D	P05423	398 aa	Predicted RBP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	NDUFA8	P51970	172 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	DHX8	Q14562	1220 aa	Known RBP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	ADAL	Q6DHV7	355 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	UBE3B	Q7Z3V4	1068 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	NBPF11	Q86T75	865 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	UBXN4	Q92575	508 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	COPRS	Q9NQ92	184 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	ANKAR	Q7Z5J8	1434 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	KCNA6	P17658	529 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	SYNE3	Q6ZMZ3	975 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	COPS6	Q7L5N1	327 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	FMR1NB	Q8N0W7	255 aa	Predicted RBP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	KCNH5	Q8NCM2	988 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	HAUS7	Q99871	368 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	DNAI1	Q9UI46	699 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	PSD	A5PKW4	1024 aa	Predicted RBP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	CCP110	O43303	1012 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	SLC39A6	Q13433	755 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	KBTBD3	Q8NAB2	608 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	TIGD1	Q96MW7	591 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	LMOD1	P29536	600 aa	Predicted RBP	10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	OTUD7B	Q6GQQ9	843 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	ARMCX5	Q6P1M9	558 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	KCNG4	Q8TDN1	519 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	C8orf76	Q96K31	380 aa		10.12	□□□□□ -0.79
PPME1-205	ENST00000539021	CARMIL3	Q8ND23	1372 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	ISM2	Q6H9L7	571 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	TMCO3	Q6UWJ1	677 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	CALCOCO1	Q9P1Z2	691 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	PDIA3	P30101	505 aa	Known RBP	10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	CLCN6	P51797	869 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	PTPN12	Q05209	780 aa	Known RBP	10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	METTL22	Q9BUU2	404 aa	Predicted RBP	10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	L2HGDH	Q9H9P8	463 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	KCND1	Q9NSA2	647 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	RTEL1	Q9NZ71	1219 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	LTN1	O94822	1766 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	RFX7	Q2KHR2	1363 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021		A0A1W2PQ27	194 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021		A0A1W2PQ64	194 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021		A0A1W2PQD8	194 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021		E7EWF7	191 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	CPLX1	O14810	134 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	SPTLC2	O15270	562 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	URI1	O94763	535 aa	Predicted RBP	10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	SERPINC1	P01008	464 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	TUBB4A	P04350	444 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	NCAPD2	Q15021	1401 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	ZNF446	Q9NWS9	450 aa		10.11	□□□□□ -0.79
PPME1-205	ENST00000539021	BBX	Q8WY36	941 aa	Predicted RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	PAG1	Q9NWQ8	432 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	CLIC4	Q9Y696	253 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	ERBB3	P21860	1342 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	SH3TC1	Q8TE82	1336 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	TEX35	Q5T0J7	233 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	ANKRD13D	Q6ZTN6	518 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	ILDR1	Q86SU0	546 aa	Predicted RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	LINC00301	Q8NCQ3	95 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	LRRN4CL	Q8ND94	238 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	DSCC1	Q9BVC3	393 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	PXDN	Q92626	1479 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	ATP5J2-PTCD1	G3V325	749 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	TULP1	O00294	542 aa	Predicted RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	PTCD1	O75127	700 aa	Known RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	H2AFX	P16104	143 aa	Predicted RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	PIP4K2A	P48426	406 aa	Predicted RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	NLRP12	P59046	1061 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	ETF1	P62495	437 aa	Known RBP	10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	FANCC	Q00597	558 aa		10.1	□□□□□ -0.79
PPME1-205	ENST00000539021	CFAP100	Q494V2	611 aa		10.1	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms