RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 USP17L4A6NCW7 530 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 ANP32CO43423 234 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 CASP7P55210 303 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 NOGQ13253 232 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 FKBP5Q13451 457 aaPredicted RBP16■□□□□ 0.15
VAMP1-206ENST00000538970 USP17L1Q7RTZ2 530 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 WDR63Q8IWG1 891 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 SULF1Q8IWU6 871 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 DNAAF4Q8WXU2 420 aa16■□□□□ 0.15
VAMP1-206ENST00000538970 ZNF646O15015 1829 aaPredicted RBP16■□□□□ 0.15
VAMP1-206ENST00000538970 VAMP4O75379 141 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 USP17L8P0C7I0 530 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 ZEB1P37275 1124 aaPredicted RBP15.99■□□□□ 0.15
VAMP1-206ENST00000538970 IGHMBP2P38935 993 aaKnown RBP15.99■□□□□ 0.15
VAMP1-206ENST00000538970 CCT4P50991 539 aaKnown RBP15.99■□□□□ 0.15
VAMP1-206ENST00000538970 ANGEL2Q5VTE6 544 aaKnown RBP15.99■□□□□ 0.15
VAMP1-206ENST00000538970 RGMBQ6NW40 437 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 C2orf69Q8N8R5 385 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 LINS1Q8NG48 757 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 MYOZ2Q9NPC6 264 aa15.99■□□□□ 0.15
VAMP1-206ENST00000538970 FAM155AB1AL88 458 aaPredicted RBP15.98■□□□□ 0.15
VAMP1-206ENST00000538970 ITGA6P23229 1130 aa15.98■□□□□ 0.15
VAMP1-206ENST00000538970 EXOSC9Q06265 439 aaKnown RBP15.98■□□□□ 0.15
VAMP1-206ENST00000538970 SCARF1Q14162 830 aa15.98■□□□□ 0.15
VAMP1-206ENST00000538970 CDCA5Q96FF9 252 aa15.98■□□□□ 0.15
VAMP1-206ENST00000538970 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
VAMP1-206ENST00000538970 CSF1RP07333 972 aa15.97■□□□□ 0.15
VAMP1-206ENST00000538970 DACT2Q5SW24 774 aa15.97■□□□□ 0.15
VAMP1-206ENST00000538970 COA1Q9GZY4 146 aa15.97■□□□□ 0.15
VAMP1-206ENST00000538970 LEMD3Q9Y2U8 911 aa15.97■□□□□ 0.15
VAMP1-206ENST00000538970 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.15
VAMP1-206ENST00000538970 ZNF316A6NFI3 1004 aaPredicted RBP15.96■□□□□ 0.15
VAMP1-206ENST00000538970 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
VAMP1-206ENST00000538970 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.15
VAMP1-206ENST00000538970 SPINK5Q9NQ38 1064 aaPredicted RBP15.96■□□□□ 0.15
VAMP1-206ENST00000538970 ZNF804BA4D1E1 1349 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 MYO3BQ8WXR4 1341 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 KLRK1P26718 216 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 STRIP1Q5VSL9 837 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 MXD3Q9BW11 206 aa15.95■□□□□ 0.14
VAMP1-206ENST00000538970 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
VAMP1-206ENST00000538970 SLC10A3P09131 477 aa15.94■□□□□ 0.14
VAMP1-206ENST00000538970 ZNF157P51786 506 aaPredicted RBP15.94■□□□□ 0.14
VAMP1-206ENST00000538970 BEND3Q5T5X7 828 aa15.94■□□□□ 0.14
VAMP1-206ENST00000538970 PAPPA2Q9BXP8 1791 aa15.94■□□□□ 0.14
VAMP1-206ENST00000538970 CACNA1FO60840 1977 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 F6X3S4 739 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 FKBP1BP68106 108 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 KIF23Q02241 960 aaPredicted RBP15.93■□□□□ 0.14
VAMP1-206ENST00000538970 CHRNDQ07001 517 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 NBPF9Q3BBW0 867 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 FBXW7Q969H0 707 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 IRS2Q9Y4H2 1338 aa15.93■□□□□ 0.14
VAMP1-206ENST00000538970 ANKRD18BA2A2Z9 1011 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 TRPA1O75762 1119 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 FOXO4P98177 505 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 OGFOD1Q8N543 542 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 RNF186Q9NXI6 227 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 SAGE1Q9NXZ1 904 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 SCAF8Q9UPN6 1271 aaKnown RBP15.92■□□□□ 0.14
VAMP1-206ENST00000538970 A0A1B0GUL6 1792 aa15.92■□□□□ 0.14
VAMP1-206ENST00000538970 WNT10BO00744 389 aa15.91■□□□□ 0.14
VAMP1-206ENST00000538970 KCNJ4P48050 445 aa15.91■□□□□ 0.14
VAMP1-206ENST00000538970 RASAL3Q86YV0 1011 aa15.91■□□□□ 0.14
VAMP1-206ENST00000538970 SASH1O94885 1247 aa15.9■□□□□ 0.14
VAMP1-206ENST00000538970 MMP14P50281 582 aa15.9■□□□□ 0.14
VAMP1-206ENST00000538970 IFIT5Q13325 482 aaKnown RBP15.9■□□□□ 0.14
VAMP1-206ENST00000538970 TTLL5Q6EMB2 1281 aa15.9■□□□□ 0.14
VAMP1-206ENST00000538970 FAM9BQ8IZU0 186 aa15.9■□□□□ 0.14
VAMP1-206ENST00000538970 HPS5Q9UPZ3 1129 aa15.9■□□□□ 0.14
VAMP1-206ENST00000538970 SNAP23O00161 211 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 GRM8O00222 908 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 TAF5LO75529 589 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 GTF2IP78347 998 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 EPHA10Q5JZY3 1008 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 C15orf52Q6ZUT6 534 aaKnown RBP15.89■□□□□ 0.13
VAMP1-206ENST00000538970 MOB2Q70IA6 237 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 CTU1Q7Z7A3 348 aaKnown RBP15.89■□□□□ 0.13
VAMP1-206ENST00000538970 KIAA0825Q8IV33 1275 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 CD209Q9NNX6 404 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 CHMP3Q9Y3E7 222 aa15.89■□□□□ 0.13
VAMP1-206ENST00000538970 PRAMEF18Q5VWM3 479 aa15.88■□□□□ 0.13
VAMP1-206ENST00000538970 LMBR1LQ6UX01 489 aa15.88■□□□□ 0.13
VAMP1-206ENST00000538970 HELBQ8NG08 1087 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-206ENST00000538970 ZBED3Q96IU2 234 aaPredicted RBP15.88■□□□□ 0.13
VAMP1-206ENST00000538970 CSRNP1Q96S65 589 aa15.88■□□□□ 0.13
VAMP1-206ENST00000538970 ZNF521Q96K83 1311 aa15.88■□□□□ 0.13
VAMP1-206ENST00000538970 ALDH1L1O75891 902 aa15.87■□□□□ 0.13
VAMP1-206ENST00000538970 REM2Q8IYK8 340 aaPredicted RBP15.87■□□□□ 0.13
VAMP1-206ENST00000538970 HDAC9Q9UKV0 1011 aa15.87■□□□□ 0.13
VAMP1-206ENST00000538970 CCDC57Q2TAC2 916 aa15.86■□□□□ 0.13
VAMP1-206ENST00000538970 APOBEC3FQ8IUX4 373 aaKnown RBP15.86■□□□□ 0.13
VAMP1-206ENST00000538970 CERS5Q8N5B7 392 aa15.86■□□□□ 0.13
VAMP1-206ENST00000538970 COL1A1P02452 1464 aaPredicted RBP15.85■□□□□ 0.13
VAMP1-206ENST00000538970 UBE2Q2LH0YL09 131 aa15.85■□□□□ 0.13
VAMP1-206ENST00000538970 IL1R1P14778 569 aa15.85■□□□□ 0.13
VAMP1-206ENST00000538970 NF2P35240 595 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms