RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 CHD2O14647 1828 aaKnown RBP8.7□□□□□ -1.02
MSH6-209ENST00000538136 KDRP35968 1356 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 CT47B1P0C2W7 299 aaPredicted RBP8.7□□□□□ -1.02
MSH6-209ENST00000538136 PLS1Q14651 629 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 SLC16A10Q8TF71 515 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 ZKSCAN3Q9BRR0 538 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.7□□□□□ -1.022e-8■□□□□ 9.7
MSH6-209ENST00000538136 ERVV-1B6SEH8 477 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 ONECUT3O60422 494 aaPredicted RBP8.7□□□□□ -1.02
MSH6-209ENST00000538136 HOXB7P09629 217 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 PRDX5P30044 214 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 CCDC84Q86UT8 332 aaPredicted RBP8.7□□□□□ -1.02
MSH6-209ENST00000538136 SDR42E1Q8WUS8 393 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 BEGAINQ9BUH8 593 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 NAPBQ9H115 298 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 ABCC4O15439 1325 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 TGFBRAP1Q8WUH2 860 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 SEC62Q99442 399 aaKnown RBP8.7□□□□□ -1.02
MSH6-209ENST00000538136 ARMT1Q9H993 441 aa8.7□□□□□ -1.02
MSH6-209ENST00000538136 LAMC1P11047 1609 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 BBOX1O75936 387 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
MSH6-209ENST00000538136 ANKRD2Q9GZV1 360 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 NMRK2Q9NPI5 230 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 BIN2Q9UBW5 565 aaPredicted RBP8.69□□□□□ -1.02
MSH6-209ENST00000538136 SLIT2O94813 1529 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 PCNTO95613 3336 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 PUM3Q15397 648 aaKnown RBP8.69□□□□□ -1.02
MSH6-209ENST00000538136 ZRSR1Q15695 479 aaKnown RBP8.69□□□□□ -1.02
MSH6-209ENST00000538136 CCDC102BQ68D86 513 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 TEX11Q8IYF3 940 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 UIMC1Q96RL1 719 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 ECE2O60344 883 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 CLSTN1O94985 981 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 USP40Q9NVE5 1235 aa8.69□□□□□ -1.02
MSH6-209ENST00000538136 MKRN1Q9UHC7 482 aaKnown RBP8.69□□□□□ -1.02
MSH6-209ENST00000538136 DCPSQ96C86 337 aaKnown RBP8.68□□□□□ -1.02
MSH6-209ENST00000538136 MAP2P11137 1827 aaKnown RBP8.68□□□□□ -1.02
MSH6-209ENST00000538136 GRIN3BO60391 1043 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 NTSR2O95665 410 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 SLURP2P0DP57 97 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 SRGNP10124 158 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 CENPQQ7L2Z9 268 aaPredicted RBP8.68□□□□□ -1.02
MSH6-209ENST00000538136 SLC4A4Q9Y6R1 1079 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 STRCP1A6NGW2 1772 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 PDE8BO95263 885 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 MCCP23508 829 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 NF2P35240 595 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 TNNI3KQ59H18 835 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 FPGT-TNNI3KV9GXZ4 949 aa8.68□□□□□ -1.02
MSH6-209ENST00000538136 MARCH6O60337 910 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 MBD4O95243 580 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 MICALL2Q8IY33 904 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 ANKRD44Q8N8A2 993 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 CNOT7Q9UIV1 285 aaKnown RBP8.67□□□□□ -1.02
MSH6-209ENST00000538136 XDHP47989 1333 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 ATRNO75882 1429 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 RXRAP19793 462 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 EPS15P42566 896 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 CCDC96Q2M329 555 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 KRT26Q7Z3Y9 468 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 HOMER1Q86YM7 354 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 ZBTB40Q9NUA8 1239 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 ABCC12Q96J65 1359 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 GMPSP49915 693 aaPredicted RBP8.67□□□□□ -1.02
MSH6-209ENST00000538136 DYNLL1P63167 89 aaKnown RBP8.67□□□□□ -1.02
MSH6-209ENST00000538136 PTPN12Q05209 780 aaKnown RBP8.67□□□□□ -1.02
MSH6-209ENST00000538136 ZNF34Q8IZ26 560 aa8.67□□□□□ -1.02
MSH6-209ENST00000538136 CNTNAP4Q9C0A0 1308 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 CYP2D7A0A087X1C5 515 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.021e-6■■■■□ 20.7
MSH6-209ENST00000538136 SPICE1Q8N0Z3 855 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 LPIN2Q92539 896 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 ISCA1Q9BUE6 129 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 NACAP1Q9BZK3 213 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 BAG3O95817 575 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 ZKSCAN1P17029 563 aaPredicted RBP8.66□□□□□ -1.02
MSH6-209ENST00000538136 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
MSH6-209ENST00000538136 ZNF444Q8N0Y2 327 aaPredicted RBP8.66□□□□□ -1.02
MSH6-209ENST00000538136 TBC1D16Q8TBP0 767 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 POLLQ9UGP5 575 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 ERICH2A1L162 156 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 CPLX1O14810 134 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 GLRX3O76003 335 aaKnown RBP8.66□□□□□ -1.02
MSH6-209ENST00000538136 IARSP41252 1262 aaKnown RBP8.66□□□□□ -1.02
MSH6-209ENST00000538136 RTKN2Q8IZC4 609 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 AKT1S1Q96B36 256 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 PAG1Q9NWQ8 432 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 BABAM1Q9NWV8 329 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 PALD1Q9ULE6 856 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 ADCY9O60503 1353 aa8.66□□□□□ -1.02
MSH6-209ENST00000538136 TSPY2A6NKD2 308 aa8.65□□□□□ -1.02
MSH6-209ENST00000538136 H7C1W4 665 aa8.65□□□□□ -1.02
MSH6-209ENST00000538136 PSMD14O00487 310 aa8.65□□□□□ -1.02
MSH6-209ENST00000538136 USP17L8P0C7I0 530 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms