RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
CLPB-209ENST00000538039 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
CLPB-209ENST00000538039 E7EWF7 191 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 M0R2C6 588 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 PDIA3P30101 505 aaKnown RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 DHX32Q7L7V1 743 aaKnown RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 DENND2AQ9ULE3 1009 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 MEGF6O75095 1541 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 CYP27B1O15528 508 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 HSPD1P10809 573 aaKnown RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 PCDHA7Q9UN72 937 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 OVOS2A0A0G2JMS6 1433 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 NBPF26B4DH59 902 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 FGD1P98174 961 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 KRT32Q14532 448 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 NBPF14Q5TI25 921 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 NBPF10Q6P3W6 841 aaKnown RBP16.54■□□□□ 0.24
CLPB-209ENST00000538039 NBPF15Q8N660 670 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 AOPEPQ8N6M6 819 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 NLRP2Q9NX02 1062 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 CLIC4Q9Y696 253 aa16.54■□□□□ 0.24
CLPB-209ENST00000538039 SLIT3O75094 1523 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 CABLES1Q8TDN4 633 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
CLPB-209ENST00000538039 SKILP12757 684 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 TTLL7Q6ZT98 887 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 FSIP1Q8NA03 581 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 HDAC5Q9UQL6 1122 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 SCN11AQ9UI33 1791 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
CLPB-209ENST00000538039 CCDC69A6NI79 296 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 NDUFA8P51970 172 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 HAND2P61296 217 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 SARM1Q6SZW1 724 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 NYAP1Q6ZVC0 841 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 AGXT2Q9BYV1 514 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 ZNF215Q9UL58 517 aaPredicted RBP16.52■□□□□ 0.24
CLPB-209ENST00000538039 MAST3O60307 1309 aa16.52■□□□□ 0.24
CLPB-209ENST00000538039 POLR3DP05423 398 aaPredicted RBP16.52■□□□□ 0.23
CLPB-209ENST00000538039 DPCR1Q3MIW9 517 aa16.52■□□□□ 0.23
CLPB-209ENST00000538039 CEP135Q66GS9 1140 aa16.52■□□□□ 0.23
CLPB-209ENST00000538039 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.23
CLPB-209ENST00000538039 ME1P48163 572 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 RBM6P78332 1123 aaKnown RBP16.51■□□□□ 0.23
CLPB-209ENST00000538039 FMR1NBQ8N0W7 255 aaPredicted RBP16.51■□□□□ 0.23
CLPB-209ENST00000538039 OSBP2Q969R2 916 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 CDC25BP30305 580 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 ISM2Q6H9L7 571 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 STX1AQ16623 288 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
CLPB-209ENST00000538039 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
CLPB-209ENST00000538039 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 MRFAP1L1Q96HT8 127 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 SH3TC1Q8TE82 1336 aa16.51■□□□□ 0.23
CLPB-209ENST00000538039 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 BIN1O00499 593 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 CHRNA2Q15822 529 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 ZMYM1Q5SVZ6 1142 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 GOLGA6L19H0YKK7 550 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 PDIA4P13667 645 aaKnown RBP16.5■□□□□ 0.23
CLPB-209ENST00000538039 KMT5BQ4FZB7 885 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 CARMIL3Q8ND23 1372 aa16.5■□□□□ 0.23
CLPB-209ENST00000538039 FAM160A1Q05DH4 1040 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 PI16Q6UXB8 463 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 NPHP1O15259 732 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 SCARF1Q14162 830 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 SNRPA1P09661 255 aaKnown RBP16.49■□□□□ 0.23
CLPB-209ENST00000538039 ADORA1P30542 326 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 LLPHQ9BRT6 129 aaKnown RBP16.49■□□□□ 0.23
CLPB-209ENST00000538039 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
CLPB-209ENST00000538039 ARMCX5Q6P1M9 558 aa16.48■□□□□ 0.23
CLPB-209ENST00000538039 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
CLPB-209ENST00000538039 HPS5Q9UPZ3 1129 aa16.48■□□□□ 0.23
CLPB-209ENST00000538039 GLI3P10071 1580 aa16.48■□□□□ 0.23
CLPB-209ENST00000538039 E4F1Q66K89 784 aaPredicted RBP16.48■□□□□ 0.23
CLPB-209ENST00000538039 CCAR2Q8N163 923 aaKnown RBP16.48■□□□□ 0.23
CLPB-209ENST00000538039 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
CLPB-209ENST00000538039 ABCC6O95255 1503 aa16.48■□□□□ 0.23
CLPB-209ENST00000538039 UBE2Q2LH0YL09 131 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 H7C1W4 665 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 FMNL2Q96PY5 1086 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 TRPM3Q9HCF6 1732 aaPredicted RBP16.47■□□□□ 0.23
CLPB-209ENST00000538039 BECN2A8MW95 431 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 FANCGO15287 622 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 A1BGP04217 495 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 LINC00301Q8NCQ3 95 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 HSD3B7Q9H2F3 369 aa16.47■□□□□ 0.23
CLPB-209ENST00000538039 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
CLPB-209ENST00000538039 ANTXR2P58335 489 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms