RNA–Protein interactions for RNA: ENST00000537983.1

NPIPB3-208, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 4

Gene NPIPB3, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-208	ENST00000537983	FMN2	Q9NZ56	1722 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NEFL	P07196	543 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	SH3PXD2A	Q5TCZ1	1133 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	CAPN12	Q6ZSI9	719 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	LYSMD3	Q7Z3D4	306 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	ANKLE2	Q86XL3	938 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	AEBP1	Q8IUX7	1158 aa		7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NIFK	Q9BYG3	293 aa	Known RBP	7.28	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NPHP4	O75161	1426 aa	Predicted RBP	7.27	□□□□□ -1.24
NPIPB3-208	ENST00000537983	NALCN	Q8IZF0	1738 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SERTM1	A2A2V5	107 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	FIGNL2	A6NMB9	653 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NOS2	P35228	1153 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	POU4F2	Q12837	409 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PDE3B	Q13370	1112 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	WDR44	Q5JSH3	913 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NBPF10	Q6P3W6	841 aa	Known RBP	7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PRICKLE2	Q7Z3G6	844 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SLC26A8	Q96RN1	970 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	MKNK1	Q9BUB5	465 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	CABP1	Q9NZU7	370 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NUDC	Q9Y266	331 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	AMOTL2	Q9Y2J4	779 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	LRRC7	Q96NW7	1537 aa		7.27	□□□□□ -1.25
NPIPB3-208	ENST00000537983	COL3A1	P02461	1466 aa	Predicted RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NKTR	P30414	1462 aa	Known RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	IQSEC2	Q5JU85	1478 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PATL2	C9JE40	543 aa	Known RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PTCD1	O75127	700 aa	Known RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	GTF2E1	P29083	439 aa	Predicted RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ARID4A	P29374	1257 aa	Predicted RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PLA2G4A	P47712	749 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983		Q6ZNB5	142 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NGEF	Q8N5V2	710 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	NUDT16	Q96DE0	195 aa	Known RBP	7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	CFAP53	Q96M91	514 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SEPT3	Q9UH03	358 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PARP3	Q9Y6F1	533 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PRR36	Q9H6K5	1346 aa		7.26	□□□□□ -1.25
NPIPB3-208	ENST00000537983	USP54	Q70EL1	1684 aa		7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	RHOQ	P17081	205 aa		7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	TRIM47	Q96LD4	638 aa		7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	QTRT2	Q9H974	415 aa	Known RBP	7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	GMPR2	Q9P2T1	348 aa	Known RBP	7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	IVNS1ABP	Q9Y6Y0	642 aa		7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ADGRL3	Q9HAR2	1447 aa		7.25	□□□□□ -1.25
NPIPB3-208	ENST00000537983	CDK12	Q9NYV4	1490 aa	Predicted RBP	7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	AATK	Q6ZMQ8	1374 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SOBP	A7XYQ1	873 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	FYB1	O15117	783 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	TXLNA	P40222	546 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PHKA2	P46019	1235 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SERPINB4	P48594	390 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	KIFC2	Q96AC6	838 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SENP2	Q9HC62	589 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ZDHHC3	Q9NYG2	299 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ZNF232	Q9UNY5	417 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ADAMTS8	Q9UP79	889 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	CHMP3	Q9Y3E7	222 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SUPT16H	Q9Y5B9	1047 aa	Known RBP	7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	USP6	P35125	1406 aa		7.24	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SENP3-EIF4A1	A0A087X0R7	540 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	KCNA6	P17658	529 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ATP4A	P20648	1035 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ERICH6B	Q5W0A0	696 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	C7orf43	Q8WVR3	580 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	VTI1A	Q96AJ9	217 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	MYO19	Q96H55	970 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	GGNBP2	Q9H3C7	697 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	OVOS2	A0A0J9YW53	1432 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	OVOS2	Q6IE36	1432 aa		7.23	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PNPLA6	Q8IY17	1366 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SSH2	Q76I76	1423 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	MAN1A2	O60476	641 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	MTHFS	P49914	203 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	C1orf53	Q5VUE5	145 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ALDH16A1	Q8IZ83	802 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	PHACTR1	Q9C0D0	580 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	SAP130	Q9H0E3	1048 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	MTMR7	Q9Y216	660 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	HCN4	Q9Y3Q4	1203 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	TTC21A	Q8NDW8	1320 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	ZNF521	Q96K83	1311 aa		7.22	□□□□□ -1.25
NPIPB3-208	ENST00000537983	RGPD8	O14715	1765 aa	Predicted RBP	7.21	□□□□□ -1.25
NPIPB3-208	ENST00000537983		A0A1B0GTH6	734 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	ZBTB7C	A1YPR0	619 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	SNRPB	P14678	240 aa	Known RBP	7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TNNT2	P45379	298 aa	Predicted RBP	7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	NAA30	Q147X3	362 aa	Predicted RBP	7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RTN1	Q16799	776 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	COX20	Q5RI15	118 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	C16orf46	Q6P387	395 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	GTF3C2	Q8WUA4	911 aa	Predicted RBP	7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	TIMMDC1	Q9NPL8	285 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	EGFL7	Q9UHF1	273 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	PIK3C2A	O00443	1686 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	RNF123	Q5XPI4	1314 aa		7.21	□□□□□ -1.26
NPIPB3-208	ENST00000537983	KIF1A	Q12756	1690 aa		7.2	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms