RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 E9PSI1 815 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 CCDC155Q8N6L0 562 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 IGSF1Q8N6C5 1336 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 NUP155O75694 1391 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 GPRASP1Q5JY77 1395 aa11.28□□□□□ -0.6
LMO3-216ENST00000537568 C10orf71Q711Q0 1435 aa11.27□□□□□ -0.6
LMO3-216ENST00000537568 ATP9BO43861 1147 aa11.27□□□□□ -0.61
LMO3-216ENST00000537568 MCCD1P59942 119 aaPredicted RBP11.27□□□□□ -0.61
LMO3-216ENST00000537568 DIEXFQ68CQ4 756 aaKnown RBP11.27□□□□□ -0.61
LMO3-216ENST00000537568 MSL1Q68DK7 614 aa11.27□□□□□ -0.61
LMO3-216ENST00000537568 ZSCAN1Q8NBB4 408 aa11.27□□□□□ -0.61
LMO3-216ENST00000537568 NHSQ6T4R5 1651 aa11.27□□□□□ -0.61
LMO3-216ENST00000537568 SLC35F4A4IF30 521 aa11.26□□□□□ -0.61
LMO3-216ENST00000537568 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
LMO3-216ENST00000537568 RNF20Q5VTR2 975 aa11.26□□□□□ -0.61
LMO3-216ENST00000537568 NUTM2GQ5VZR2 741 aa11.26□□□□□ -0.61
LMO3-216ENST00000537568 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
LMO3-216ENST00000537568 CCDC85CA6NKD9 419 aa11.25□□□□□ -0.61
LMO3-216ENST00000537568 KCNQ4P56696 695 aa11.25□□□□□ -0.61
LMO3-216ENST00000537568 ZNF592Q92610 1267 aa11.25□□□□□ -0.61
LMO3-216ENST00000537568 BRD4O60885 1362 aaPredicted RBP11.25□□□□□ -0.61
LMO3-216ENST00000537568 A0A0C4DFX4 3053 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 ATP5J2-PTCD1G3V325 749 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 SCTRP47872 440 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 LBX1P52954 281 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 CC2D2BQ6DHV5 1058 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 COL23A1Q86Y22 540 aaPredicted RBP11.24□□□□□ -0.61
LMO3-216ENST00000537568 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
LMO3-216ENST00000537568 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 ACSBG1Q96GR2 724 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 TFCP2L1Q9NZI6 479 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 YTHDC2Q9H6S0 1430 aaKnown RBP11.24□□□□□ -0.61
LMO3-216ENST00000537568 PXDNLA1KZ92 1463 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 KCPQ6ZWJ8 1503 aa11.24□□□□□ -0.61
LMO3-216ENST00000537568 AKAP12Q02952 1782 aa11.23□□□□□ -0.61
LMO3-216ENST00000537568 CTCFP49711 727 aaPredicted RBP11.23□□□□□ -0.61
LMO3-216ENST00000537568 GPR161Q8N6U8 529 aaKnown RBP11.23□□□□□ -0.61
LMO3-216ENST00000537568 SMC1BQ8NDV3 1235 aa11.23□□□□□ -0.61
LMO3-216ENST00000537568 PCDHB11Q9Y5F2 797 aa11.23□□□□□ -0.61
LMO3-216ENST00000537568 PPLO60437 1756 aa11.23□□□□□ -0.61
LMO3-216ENST00000537568 WNK3Q9BYP7 1800 aa11.23□□□□□ -0.61
LMO3-216ENST00000537568 RPGRIP1LQ68CZ1 1315 aa11.22□□□□□ -0.61
LMO3-216ENST00000537568 B4GALNT3Q6L9W6 998 aa11.22□□□□□ -0.61
LMO3-216ENST00000537568 BTAF1O14981 1849 aa11.21□□□□□ -0.61
LMO3-216ENST00000537568 USP6P35125 1406 aa11.21□□□□□ -0.61
LMO3-216ENST00000537568 PIK3CDO00329 1044 aa11.21□□□□□ -0.61
LMO3-216ENST00000537568 ITGA6P23229 1130 aa11.21□□□□□ -0.61
LMO3-216ENST00000537568 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
LMO3-216ENST00000537568 RRAGCQ9HB90 399 aa11.21□□□□□ -0.61
LMO3-216ENST00000537568 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
LMO3-216ENST00000537568 RNF144AP50876 292 aaPredicted RBP11.2□□□□□ -0.62
LMO3-216ENST00000537568 SAFB2Q14151 953 aaKnown RBP eCLIP11.2□□□□□ -0.62
LMO3-216ENST00000537568 LYSMD3Q7Z3D4 306 aa11.2□□□□□ -0.62
LMO3-216ENST00000537568 NANOS1Q8WY41 292 aaKnown RBP11.2□□□□□ -0.62
LMO3-216ENST00000537568 MKRN1Q9UHC7 482 aaKnown RBP11.2□□□□□ -0.62
LMO3-216ENST00000537568 CUL9Q8IWT3 2517 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 KIF1BO60333 1816 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 A0A1W2PRU2 124 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 FAM181BA6NEQ2 426 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 MEN1O00255 615 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 HSPA8P11142 646 aaKnown RBP11.19□□□□□ -0.62
LMO3-216ENST00000537568 KRT76Q01546 638 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 TMEM164Q5U3C3 297 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 PRICKLE2Q7Z3G6 844 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 STK32AQ8WU08 396 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 CEP126Q9P2H0 1117 aa11.19□□□□□ -0.62
LMO3-216ENST00000537568 SKIP12755 728 aa11.18□□□□□ -0.62
LMO3-216ENST00000537568 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
LMO3-216ENST00000537568 OSBPL3Q9H4L5 887 aa11.18□□□□□ -0.62
LMO3-216ENST00000537568 ZMIZ1Q9ULJ6 1067 aa11.18□□□□□ -0.62
LMO3-216ENST00000537568 GNEQ9Y223 722 aaKnown RBP11.18□□□□□ -0.62
LMO3-216ENST00000537568 CDC14CA4D256 554 aa11.17□□□□□ -0.62
LMO3-216ENST00000537568 CYP2U1Q7Z449 544 aa11.17□□□□□ -0.62
LMO3-216ENST00000537568 NGDNQ8NEJ9 315 aaKnown RBP11.17□□□□□ -0.62
LMO3-216ENST00000537568 CCDC85AQ96PX6 553 aaPredicted RBP11.17□□□□□ -0.62
LMO3-216ENST00000537568 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
LMO3-216ENST00000537568 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
LMO3-216ENST00000537568 QRICH2Q9H0J4 1663 aa11.17□□□□□ -0.62
LMO3-216ENST00000537568 USP17L3A6NCW0 530 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 USP17L4A6NCW7 530 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 RHOQP17081 205 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 C9orf131Q5VYM1 1079 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 USP17L2Q6R6M4 530 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 TOM1L2Q6ZVM7 507 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 USP17L1Q7RTZ2 530 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 VWA5B2Q8N398 1253 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 CNTNAP3BQ96NU0 1288 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 CDCA7Q9BWT1 371 aaPredicted RBP11.16□□□□□ -0.62
LMO3-216ENST00000537568 CNTNAP3Q9BZ76 1288 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
LMO3-216ENST00000537568 GCP02774 474 aa11.15□□□□□ -0.62
LMO3-216ENST00000537568 GPC1P35052 558 aa11.15□□□□□ -0.62
LMO3-216ENST00000537568 ELOAQ14241 798 aaKnown RBP11.15□□□□□ -0.62
LMO3-216ENST00000537568 DEPDC4Q8N2C3 294 aa11.15□□□□□ -0.62
LMO3-216ENST00000537568 COL25A1Q9BXS0 654 aaPredicted RBP11.15□□□□□ -0.62
LMO3-216ENST00000537568 ARHGEF10LQ9HCE6 1279 aa11.15□□□□□ -0.62
LMO3-216ENST00000537568 CNTNAP1P78357 1384 aa11.15□□□□□ -0.63
LMO3-216ENST00000537568 WDR17Q8IZU2 1322 aa11.14□□□□□ -0.63
LMO3-216ENST00000537568 SZT2Q5T011 3432 aa11.14□□□□□ -0.63
LMO3-216ENST00000537568 USP17L5A8MUK1 530 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms