RNA–Protein interactions for RNA: ENST00000537179.1

LPCAT3-206, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 1,135 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-206ENST00000537179 USP17L1Q7RTZ2 530 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 FAM89AQ96GI7 184 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 WNK4Q96J92 1243 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 ANKIB1Q9P2G1 1089 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 SSC5DA1L4H1 1573 aa19.99■□□□□ 0.79
LPCAT3-206ENST00000537179 SASH1O94885 1247 aa19.98■□□□□ 0.79
LPCAT3-206ENST00000537179 SP3Q02447 781 aa19.98■□□□□ 0.79
LPCAT3-206ENST00000537179 PTCH2Q9Y6C5 1203 aa19.98■□□□□ 0.79
LPCAT3-206ENST00000537179 MNX1P50219 401 aaPredicted RBP19.97■□□□□ 0.79
LPCAT3-206ENST00000537179 CLMNQ96JQ2 1002 aa19.97■□□□□ 0.79
LPCAT3-206ENST00000537179 PRO3102Q9H379 93 aa19.97■□□□□ 0.79
LPCAT3-206ENST00000537179 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.97■□□□□ 0.79
LPCAT3-206ENST00000537179 COL1A1P02452 1464 aaPredicted RBP19.97■□□□□ 0.79
LPCAT3-206ENST00000537179 MYCP01106 439 aaPredicted RBP19.96■□□□□ 0.79
LPCAT3-206ENST00000537179 NBPF11Q86T75 865 aa19.96■□□□□ 0.79
LPCAT3-206ENST00000537179 SLC10A4Q96EP9 437 aa19.96■□□□□ 0.79
LPCAT3-206ENST00000537179 MXD3Q9BW11 206 aa19.96■□□□□ 0.79
LPCAT3-206ENST00000537179 APOBEC3FQ8IUX4 373 aaKnown RBP19.95■□□□□ 0.78
LPCAT3-206ENST00000537179 SEC31BQ9NQW1 1179 aa19.95■□□□□ 0.78
LPCAT3-206ENST00000537179 TSPYL4Q9UJ04 414 aa19.95■□□□□ 0.78
LPCAT3-206ENST00000537179 RTL5Q5HYW3 569 aaPredicted RBP19.94■□□□□ 0.78
LPCAT3-206ENST00000537179 PODNQ7Z5L7 613 aa19.94■□□□□ 0.78
LPCAT3-206ENST00000537179 MAP3K11Q16584 847 aa19.93■□□□□ 0.78
LPCAT3-206ENST00000537179 DACT2Q5SW24 774 aa19.93■□□□□ 0.78
LPCAT3-206ENST00000537179 OGFOD1Q8N543 542 aa19.93■□□□□ 0.78
LPCAT3-206ENST00000537179 ISCA1Q9BUE6 129 aa19.93■□□□□ 0.78
LPCAT3-206ENST00000537179 IRS4O14654 1257 aaPredicted RBP19.92■□□□□ 0.78
LPCAT3-206ENST00000537179 OTUD7BQ6GQQ9 843 aa19.92■□□□□ 0.78
LPCAT3-206ENST00000537179 PTPN18Q99952 460 aa19.92■□□□□ 0.78
LPCAT3-206ENST00000537179 XDHP47989 1333 aa19.92■□□□□ 0.78
LPCAT3-206ENST00000537179 WTIPA6NIX2 430 aaPredicted RBP19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 ATP5J2-PTCD1G3V325 749 aa19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 GJA5P36382 358 aa19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 DPF3Q92784 378 aa19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 SHISA4Q96DD7 197 aa19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 VCANP13611 3396 aa19.91■□□□□ 0.78
LPCAT3-206ENST00000537179 SOX1O00570 391 aaPredicted RBP19.9■□□□□ 0.78
LPCAT3-206ENST00000537179 NFE2L2Q16236 605 aa19.9■□□□□ 0.78
LPCAT3-206ENST00000537179 SH3TC2Q8TF17 1288 aa19.9■□□□□ 0.78
LPCAT3-206ENST00000537179 MYO3BQ8WXR4 1341 aa19.9■□□□□ 0.78
LPCAT3-206ENST00000537179 MED23Q9ULK4 1368 aa19.9■□□□□ 0.78
LPCAT3-206ENST00000537179 PLBD2Q8NHP8 589 aa19.89■□□□□ 0.77
LPCAT3-206ENST00000537179 FBXW7Q969H0 707 aa19.89■□□□□ 0.77
LPCAT3-206ENST00000537179 CLSPNQ9HAW4 1339 aa19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 TESPA1A2RU30 521 aaPredicted RBP19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 NEFMP07197 916 aa19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 LRCH3Q96II8 777 aa19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 ZBED3Q96IU2 234 aaPredicted RBP19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 DEFB129Q9H1M3 183 aa19.88■□□□□ 0.77
LPCAT3-206ENST00000537179 MYH3P11055 1940 aa19.87■□□□□ 0.77
LPCAT3-206ENST00000537179 ATP2B4P23634 1241 aa19.87■□□□□ 0.77
LPCAT3-206ENST00000537179 PLEKHF1Q96S99 279 aa19.87■□□□□ 0.77
LPCAT3-206ENST00000537179 PPP1R12BO60237 982 aaPredicted RBP19.86■□□□□ 0.77
LPCAT3-206ENST00000537179 ARHGEF6Q15052 776 aa19.86■□□□□ 0.77
LPCAT3-206ENST00000537179 STRIP1Q5VSL9 837 aa19.86■□□□□ 0.77
LPCAT3-206ENST00000537179 CHPF2Q9P2E5 772 aa19.86■□□□□ 0.77
LPCAT3-206ENST00000537179 UNCXA6NJT0 531 aa19.85■□□□□ 0.77
LPCAT3-206ENST00000537179 KIAA0825Q8IV33 1275 aa19.85■□□□□ 0.77
LPCAT3-206ENST00000537179 ALPK3Q96L96 1907 aa19.84■□□□□ 0.77
LPCAT3-206ENST00000537179 A0A1W2PPC1 479 aa19.84■□□□□ 0.77
LPCAT3-206ENST00000537179 MMP14P50281 582 aa19.84■□□□□ 0.77
LPCAT3-206ENST00000537179 ANKRD13DQ6ZTN6 518 aa19.84■□□□□ 0.77
LPCAT3-206ENST00000537179 SPTBN5Q9NRC6 3674 aaKnown RBP19.83■□□□□ 0.77
LPCAT3-206ENST00000537179 TAF1CQ15572 869 aaPredicted RBP19.83■□□□□ 0.77
LPCAT3-206ENST00000537179 CCDC152Q4G0S7 254 aa19.83■□□□□ 0.77
LPCAT3-206ENST00000537179 UBE2Q1Q7Z7E8 422 aa19.83■□□□□ 0.77
LPCAT3-206ENST00000537179 CCDC85AQ96PX6 553 aaPredicted RBP19.83■□□□□ 0.77
LPCAT3-206ENST00000537179 ZBTB7BO15156 539 aaPredicted RBP19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 TRIM28Q13263 835 aaKnown RBP19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 MTFR1Q15390 333 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 KRT24Q2M2I5 525 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 MS4A4AQ96JQ5 239 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 HTATIP2Q9BUP3 242 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 ARHGAP39Q9C0H5 1083 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 PPP2R3BQ9Y5P8 575 aa19.82■□□□□ 0.76
LPCAT3-206ENST00000537179 IREB2P48200 963 aaKnown RBP19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 ANKRD18AQ8IVF6 992 aa19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 ZBTB38Q8NAP3 1195 aaPredicted RBP19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 BRI3BPQ8WY22 251 aa19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 COL25A1Q9BXS0 654 aaPredicted RBP19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 ZFYVE28Q9HCC9 887 aa19.81■□□□□ 0.76
LPCAT3-206ENST00000537179 ZNF804BA4D1E1 1349 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 NBPF12Q5TAG4 269 aaPredicted RBP19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 ANKRD13AQ8IZ07 590 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 OPTNQ96CV9 577 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 COA1Q9GZY4 146 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 BABAM1Q9NWV8 329 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 NR2E3Q9Y5X4 410 aa19.8■□□□□ 0.76
LPCAT3-206ENST00000537179 USP2O75604 605 aaPredicted RBP19.79■□□□□ 0.76
LPCAT3-206ENST00000537179 TXNRD3Q86VQ6 643 aa19.79■□□□□ 0.76
LPCAT3-206ENST00000537179 ELP3Q9H9T3 547 aa19.79■□□□□ 0.76
LPCAT3-206ENST00000537179 ARAP2Q8WZ64 1704 aa19.79■□□□□ 0.76
LPCAT3-206ENST00000537179 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 LACTBP83111 547 aaPredicted RBP19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 DLGAP5Q15398 846 aa19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 SUPT20HL1Q3ZLR7 823 aa19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 TTLL5Q6EMB2 1281 aa19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 FAM43AQ8N2R8 423 aa19.78■□□□□ 0.76
LPCAT3-206ENST00000537179 PCDHAC2Q9Y5I4 1007 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms