RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 ZMYND8Q9ULU4 1186 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-217ENST00000537162 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
CPSF7-217ENST00000537162 POTEB2H3BUK9 544 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 TNFRSF10AO00220 468 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 MAP3K12Q12852 859 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 PPP1R42Q7Z4L9 355 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 TDHQ8IZJ6 230 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 NKX2-3Q8TAU0 364 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 SNX27Q96L92 541 aa12.86□□□□□ -0.35
CPSF7-217ENST00000537162 WNT10BO00744 389 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 SASH1O94885 1247 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 CTGFP29279 349 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 OTUD7BQ6GQQ9 843 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 TBC1D16Q8TBP0 767 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 CELF1Q92879 486 aaKnown RBP12.85□□□□□ -0.35
CPSF7-217ENST00000537162 MXD3Q9BW11 206 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 OTOFQ9HC10 1997 aa12.85□□□□□ -0.35
CPSF7-217ENST00000537162 SYN1P17600 705 aa12.84□□□□□ -0.35
CPSF7-217ENST00000537162 MAGEA10P43363 369 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 ARHGEF6Q15052 776 aa12.84□□□□□ -0.35
CPSF7-217ENST00000537162 GIGYF2Q6Y7W6 1299 aaKnown RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 KIF6Q6ZMV9 814 aa12.84□□□□□ -0.35
CPSF7-217ENST00000537162 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 U2AF1L4Q8WU68 220 aaKnown RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 UTP14AQ9BVJ6 771 aaKnown RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
CPSF7-217ENST00000537162 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
CPSF7-217ENST00000537162 MYL6BP14649 208 aa12.83□□□□□ -0.36
CPSF7-217ENST00000537162 TAF1CQ15572 869 aaPredicted RBP12.83□□□□□ -0.36
CPSF7-217ENST00000537162 MAP3K11Q16584 847 aa12.83□□□□□ -0.36
CPSF7-217ENST00000537162 C7orf61Q8IZ16 206 aa12.83□□□□□ -0.36
CPSF7-217ENST00000537162 SYMPKQ92797 1274 aaKnown RBP12.83□□□□□ -0.36
CPSF7-217ENST00000537162 ZNF428Q96B54 188 aa12.83□□□□□ -0.36
CPSF7-217ENST00000537162 MS4A4AQ96JQ5 239 aa12.83□□□□□ -0.36
CPSF7-217ENST00000537162 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
CPSF7-217ENST00000537162 BRI3BPQ8WY22 251 aa12.82□□□□□ -0.36
CPSF7-217ENST00000537162 NECTIN2Q92692 538 aa12.82□□□□□ -0.36
CPSF7-217ENST00000537162 EYA3Q99504 573 aa12.82□□□□□ -0.36
CPSF7-217ENST00000537162 GRK4P32298 578 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 PARP10Q53GL7 1025 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 FAM109BQ6ICB4 259 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-217ENST00000537162 TMC4Q7Z404 712 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 FAM43AQ8N2R8 423 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 CDX2Q99626 313 aaPredicted RBP12.81□□□□□ -0.36
CPSF7-217ENST00000537162 ZC3H12CQ9C0D7 883 aaKnown RBP12.81□□□□□ -0.36
CPSF7-217ENST00000537162 UNC93B1Q9H1C4 597 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 ZFYVE28Q9HCC9 887 aa12.81□□□□□ -0.36
CPSF7-217ENST00000537162 SGPL1O95470 568 aa12.8□□□□□ -0.36
CPSF7-217ENST00000537162 GAS2L2Q8NHY3 880 aa12.8□□□□□ -0.36
CPSF7-217ENST00000537162 DIS3LQ8TF46 1054 aaKnown RBP12.8□□□□□ -0.36
CPSF7-217ENST00000537162 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
CPSF7-217ENST00000537162 RIPOR2Q9Y4F9 1068 aa12.8□□□□□ -0.36
CPSF7-217ENST00000537162 SYNGAP1Q96PV0 1343 aa12.8□□□□□ -0.36
CPSF7-217ENST00000537162 COL2A1P02458 1487 aaPredicted RBP12.79□□□□□ -0.36
CPSF7-217ENST00000537162 G3V3G9 751 aa12.79□□□□□ -0.36
CPSF7-217ENST00000537162 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
CPSF7-217ENST00000537162 MCM10Q7L590 875 aa12.79□□□□□ -0.36
CPSF7-217ENST00000537162 PAWRQ96IZ0 340 aaKnown RBP12.79□□□□□ -0.36
CPSF7-217ENST00000537162 UBE2OQ9C0C9 1292 aaKnown RBP12.79□□□□□ -0.36
CPSF7-217ENST00000537162 OPTNQ96CV9 577 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 PHACTR3Q96KR7 559 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 TRIM47Q96LD4 638 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 PANK3Q9H999 370 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 MIS18AQ9NYP9 233 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 SRRDQ9UH36 339 aa12.78□□□□□ -0.36
CPSF7-217ENST00000537162 USP17L3A6NCW0 530 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 USP17L4A6NCW7 530 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 USP2O75604 605 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-217ENST00000537162 UFL1O94874 794 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 OSBPP22059 807 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 PRMT2P55345 433 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 KIF22Q14807 665 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 USP17L1Q7RTZ2 530 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 APOBEC3FQ8IUX4 373 aaKnown RBP12.77□□□□□ -0.37
CPSF7-217ENST00000537162 DEFB129Q9H1M3 183 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 ELP3Q9H9T3 547 aa12.77□□□□□ -0.37
CPSF7-217ENST00000537162 BIN2Q9UBW5 565 aaPredicted RBP12.77□□□□□ -0.37
CPSF7-217ENST00000537162 CDH23Q9H251 3354 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 TLR2O60603 784 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
CPSF7-217ENST00000537162 TFRCP02786 760 aaKnown RBP12.76□□□□□ -0.37
CPSF7-217ENST00000537162 DCTN1Q14203 1278 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 CCL15Q16663 113 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 NLRP10Q86W26 655 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 RAET1EQ8TD07 263 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
CPSF7-217ENST00000537162 THUMPD2Q9BTF0 503 aaKnown RBP12.76□□□□□ -0.37
CPSF7-217ENST00000537162 PPP1R12BO60237 982 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-217ENST00000537162 GNRH1P01148 92 aa12.75□□□□□ -0.37
CPSF7-217ENST00000537162 PSMC4P43686 418 aa12.75□□□□□ -0.37
CPSF7-217ENST00000537162 TJAP1Q5JTD0 557 aa12.75□□□□□ -0.37
CPSF7-217ENST00000537162 DACT2Q5SW24 774 aa12.75□□□□□ -0.37
CPSF7-217ENST00000537162 NBPF12Q5TAG4 269 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-217ENST00000537162 ZBED3Q96IU2 234 aaPredicted RBP12.75□□□□□ -0.37
CPSF7-217ENST00000537162 COL1A1P02452 1464 aaPredicted RBP12.74□□□□□ -0.37
CPSF7-217ENST00000537162 MYPNQ86TC9 1320 aa12.74□□□□□ -0.37
CPSF7-217ENST00000537162 LRP10Q7Z4F1 713 aa12.74□□□□□ -0.37
CPSF7-217ENST00000537162 USP38Q8NB14 1042 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms