RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 DTNBO60941 627 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 GSPT1P15170 499 aaKnown RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 PDE1AP54750 535 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 UBASH3AP57075 661 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 CCT2P78371 535 aaKnown RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 PPP2R3AQ06190 1150 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 BPIFA3Q9BQP9 254 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 CARD6Q9BX69 1037 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ZFYVE16Q7Z3T8 1539 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 TET3O43151 1660 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ABCA8O94911 1581 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ZRANB2O95218 330 aaKnown RBP eCLIP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 SARNPP82979 210 aaKnown RBP6.17□□□□□ -1.42
PTPRD-213ENST00000537002 MCM10Q7L590 875 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 ANKRD18AQ8IVF6 992 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 TAF4BQ92750 862 aa6.17□□□□□ -1.42
PTPRD-213ENST00000537002 FYB1O15117 783 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 XBP1P17861 261 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 IRX1P78414 480 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 TMX4Q9H1E5 349 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 LZTFL1Q9NQ48 299 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 ORC3Q9UBD5 711 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 MTMR7Q9Y216 660 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 ARHGAP6O43182 974 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 HSF2BPO75031 334 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 GSCP56915 257 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 ATRIPQ8WXE1 791 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 IFNKQ9P0W0 207 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 STAP2Q9UGK3 403 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 FHOD1Q9Y613 1164 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 LMTK3Q96Q04 1460 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 PSEN1P49768 467 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CORO7P57737 925 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 LRMPQ12912 555 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 NEDD9Q14511 834 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 TADA2BQ86TJ2 420 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CBX8Q9HC52 389 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 HYPKQ9NX55 129 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 POLKQ9UBT6 870 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CDC42BPGQ6DT37 1551 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 AK2P54819 239 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 LMNB2Q03252 620 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 SPA17Q15506 151 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 HDGFL1Q5TGJ6 251 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 IQSEC3Q9UPP2 1182 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 INO80Q9ULG1 1556 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 YEATS4O95619 227 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CLNS1AP54105 237 aaKnown RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 OTUD6BQ8N6M0 293 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 UBXN6Q9BZV1 441 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 MAP3K4Q9Y6R4 1608 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 FRMPD1Q5SYB0 1578 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 POLR3DP05423 398 aaPredicted RBP6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CNNM3Q8NE01 707 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 AFAP1L1Q8TED9 768 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 RUBCNQ92622 972 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 JADE2Q9NQC1 790 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 HMG20BQ9P0W2 317 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 MSH6P52701 1360 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 IFFO1Q0D2I5 559 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 ERCC6LQ2NKX8 1250 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CCDC121Q6ZUS5 278 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CAPZA3Q96KX2 299 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 MBIPQ9NS73 344 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 ADAM21Q9UKJ8 722 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 MRVI1Q9Y6F6 885 aa6.16□□□□□ -1.42
PTPRD-213ENST00000537002 CADPS2Q86UW7 1296 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 TTC5Q8N0Z6 440 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 OTUD7AQ8TE49 926 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-213ENST00000537002 CCDC178Q5BJE1 867 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 RAB11FIP4Q86YS3 637 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 PPRC1Q5VV67 1664 aaKnown RBP6.15□□□□□ -1.42
PTPRD-213ENST00000537002 SEC31AO94979 1220 aaKnown RBP6.15□□□□□ -1.42
PTPRD-213ENST00000537002 EZRP15311 586 aaKnown RBP6.15□□□□□ -1.42
PTPRD-213ENST00000537002 LMOD1P29536 600 aaPredicted RBP6.15□□□□□ -1.42
PTPRD-213ENST00000537002 CXorf56Q9H5V9 222 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 CABP1Q9NZU7 370 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 ARAP3Q8WWN8 1544 aa6.15□□□□□ -1.42
PTPRD-213ENST00000537002 ZEB2O60315 1214 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 TADA3O75528 432 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 GLRX3O76003 335 aaKnown RBP6.15□□□□□ -1.43
PTPRD-213ENST00000537002 NEBLO76041 1014 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 TXLNAP40222 546 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 RRS1Q15050 365 aaKnown RBP6.15□□□□□ -1.43
PTPRD-213ENST00000537002 FAM76AQ8TAV0 307 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 NUP133Q8WUM0 1156 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 C8orf76Q96K31 380 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 ALDH8A1Q9H2A2 487 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-213ENST00000537002 TTC21BQ7Z4L5 1316 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 VAMP4O75379 141 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 CPA1P15085 419 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 GOPCQ9HD26 462 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 MYO1AQ9UBC5 1043 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 NRXN1Q9ULB1 1477 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 GOLGA6L10A0A0M3HER8 536 aa6.15□□□□□ -1.43
PTPRD-213ENST00000537002 ZKSCAN8Q15776 578 aaPredicted RBP6.15□□□□□ -1.43
PTPRD-213ENST00000537002 INPP5BP32019 993 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 GRIPAP1Q4V328 841 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 ZNF569Q5MCW4 686 aa6.14□□□□□ -1.43
PTPRD-213ENST00000537002 TBC1D22AQ8WUA7 517 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms