RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
SMG6-203ENST00000536871 LETM1O95202 739 aaPredicted RBP16.09■□□□□ 0.17
SMG6-203ENST00000536871 LARGE1O95461 756 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 ADORA1P30542 326 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 PIP4K2BP78356 416 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 FGD1P98174 961 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 UBE3CQ15386 1083 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
SMG6-203ENST00000536871 CCDC129Q6ZRS4 1044 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 MPHOSPH8Q99549 860 aa16.09■□□□□ 0.17
SMG6-203ENST00000536871 CNTNAP4Q9C0A0 1308 aa16.08■□□□□ 0.17
SMG6-203ENST00000536871 SUSD4Q5VX71 490 aa16.08■□□□□ 0.17
SMG6-203ENST00000536871 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.17
SMG6-203ENST00000536871 FNBP4Q8N3X1 1017 aaPredicted RBP16.08■□□□□ 0.17
SMG6-203ENST00000536871 GTF3C6Q969F1 213 aa16.08■□□□□ 0.17
SMG6-203ENST00000536871 AGXT2Q9BYV1 514 aa16.08■□□□□ 0.17
SMG6-203ENST00000536871 MTMR6Q9Y217 621 aa16.08■□□□□ 0.17
SMG6-203ENST00000536871 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 A0A0G2JS52 829 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 IGHMBP2P38935 993 aaKnown RBP16.08■□□□□ 0.16
SMG6-203ENST00000536871 ITPK1Q13572 414 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 WASHC4Q2M389 1173 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 RC3H1Q5TC82 1133 aaKnown RBP16.08■□□□□ 0.16
SMG6-203ENST00000536871 GPT2Q8TD30 523 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 NGLY1Q96IV0 654 aa16.08■□□□□ 0.16
SMG6-203ENST00000536871 CCDC85AQ96PX6 553 aaPredicted RBP16.08■□□□□ 0.16
SMG6-203ENST00000536871 CDC5LQ99459 802 aaKnown RBP16.08■□□□□ 0.16
SMG6-203ENST00000536871 ATRNO75882 1429 aa16.07■□□□□ 0.16
SMG6-203ENST00000536871 FGFR2P21802 821 aa16.07■□□□□ 0.16
SMG6-203ENST00000536871 ZAP70P43403 619 aa16.07■□□□□ 0.16
SMG6-203ENST00000536871 UBE2HP62256 183 aa16.07■□□□□ 0.16
SMG6-203ENST00000536871 HMGN5P82970 282 aaKnown RBP16.07■□□□□ 0.16
SMG6-203ENST00000536871 Q6ZUG5 572 aa16.07■□□□□ 0.16
SMG6-203ENST00000536871 NIP7Q9Y221 180 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMG6-203ENST00000536871 UBAP1LF5GYI3 381 aa16.06■□□□□ 0.16
SMG6-203ENST00000536871 FOXD4L5Q5VV16 416 aaPredicted RBP16.06■□□□□ 0.16
SMG6-203ENST00000536871 SYNE4Q8N205 404 aa16.06■□□□□ 0.16
SMG6-203ENST00000536871 FOXD4L4Q8WXT5 416 aaPredicted RBP16.06■□□□□ 0.16
SMG6-203ENST00000536871 OSBP2Q969R2 916 aa16.06■□□□□ 0.16
SMG6-203ENST00000536871 PFKFB2O60825 505 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 NTSR2O95665 410 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 EXOSC10Q01780 885 aaKnown RBP16.05■□□□□ 0.16
SMG6-203ENST00000536871 ZNF274Q96GC6 653 aaPredicted RBP16.05■□□□□ 0.16
SMG6-203ENST00000536871 BCL9LQ86UU0 1499 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 E7EWF7 191 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 M0R2C6 588 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 ADD2P35612 726 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 MCAMP43121 646 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 KRT85P78386 507 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 ST3GAL1Q11201 340 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 CCDC102BQ68D86 513 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 USP48Q86UV5 1035 aa16.05■□□□□ 0.16
SMG6-203ENST00000536871 LARP6Q9BRS8 491 aaKnown RBP16.05■□□□□ 0.16
SMG6-203ENST00000536871 FAM98CQ17RN3 349 aaKnown RBP16.04■□□□□ 0.16
SMG6-203ENST00000536871 NECAB1Q8N987 351 aa16.04■□□□□ 0.16
SMG6-203ENST00000536871 RGS22Q8NE09 1264 aa16.04■□□□□ 0.16
SMG6-203ENST00000536871 LAMB2P55268 1798 aa16.04■□□□□ 0.16
SMG6-203ENST00000536871 ZMYM6O95789 1325 aa16.04■□□□□ 0.16
SMG6-203ENST00000536871 NASPP49321 788 aaPredicted RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 EVCP57679 992 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 GAS2L3Q86XJ1 694 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 NYXQ9GZU5 481 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 SCAND2PQ9GZW5 306 aaPredicted RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 ZSCAN16Q9H4T2 348 aaPredicted RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 COL5A3P25940 1745 aaPredicted RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 ARAP2Q8WZ64 1704 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 ELP1O95163 1332 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 GPAA1O43292 621 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 DHX16O60231 1041 aaKnown RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 CCDC173Q0VFZ6 552 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 SCARF1Q14162 830 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 SF3B3Q15393 1217 aaKnown RBP16.03■□□□□ 0.16
SMG6-203ENST00000536871 BRF1Q92994 677 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 C8orf37Q96NL8 207 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 TAF6LQ9Y6J9 622 aa16.03■□□□□ 0.16
SMG6-203ENST00000536871 ZNF213O14771 459 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
SMG6-203ENST00000536871 SLC9C2Q5TAH2 1124 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 NCOA7Q8NI08 942 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 SMARCC2Q8TAQ2 1214 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 TMEM63CQ9P1W3 806 aa16.02■□□□□ 0.16
SMG6-203ENST00000536871 BCORQ6W2J9 1755 aa16.02■□□□□ 0.15
SMG6-203ENST00000536871 HMGB2P26583 209 aaKnown RBP16.01■□□□□ 0.15
SMG6-203ENST00000536871 MCM5P33992 734 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 TRDNQ13061 729 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 SLC10A5Q5PT55 438 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 CCDC183Q5T5S1 534 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 RALYLQ86SE5 291 aaKnown RBP16.01■□□□□ 0.15
SMG6-203ENST00000536871 KAT6BQ8WYB5 2073 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 GNAT2P19087 354 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 ALX1Q15699 326 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 ATL3Q6DD88 541 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 NAA16Q6N069 864 aaPredicted RBP16.01■□□□□ 0.15
SMG6-203ENST00000536871 SPATA5Q8NB90 893 aa16.01■□□□□ 0.15
SMG6-203ENST00000536871 TCEANC2Q96MN5 208 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 254.1 ms