RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 SCARF1Q14162 830 aa25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 DNAAF4Q8WXU2 420 aa25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 GMLQ99445 158 aa25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 PLA2G12BQ9BX93 195 aa25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 SALL2Q9Y467 1007 aaPredicted RBP25.14■■□□□ 1.62
TNFRSF1B-204ENST00000536782 ASTN2O75129 1339 aaPredicted RBP25.13■■□□□ 1.61
TNFRSF1B-204ENST00000536782 RGMBQ6NW40 437 aa25.13■■□□□ 1.61
TNFRSF1B-204ENST00000536782 LINS1Q8NG48 757 aa25.13■■□□□ 1.61
TNFRSF1B-204ENST00000536782 VAMP4O75379 141 aa25.12■■□□□ 1.61
TNFRSF1B-204ENST00000536782 ANGEL2Q5VTE6 544 aaKnown RBP25.12■■□□□ 1.61
TNFRSF1B-204ENST00000536782 MYOZ2Q9NPC6 264 aa25.12■■□□□ 1.61
TNFRSF1B-204ENST00000536782 ITGA6P23229 1130 aa25.11■■□□□ 1.61
TNFRSF1B-204ENST00000536782 CASP7P55210 303 aa25.11■■□□□ 1.61
TNFRSF1B-204ENST00000536782 LEMD3Q9Y2U8 911 aa25.11■■□□□ 1.61
TNFRSF1B-204ENST00000536782 EXOSC9Q06265 439 aaKnown RBP25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 CCDC102AQ96A19 550 aa25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 CDCA5Q96FF9 252 aa25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 MPHOSPH8Q99549 860 aa25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 ANKRD2Q9GZV1 360 aa25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 COA1Q9GZY4 146 aa25.1■■□□□ 1.61
TNFRSF1B-204ENST00000536782 ZNF316A6NFI3 1004 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF1B-204ENST00000536782 FAM155AB1AL88 458 aaPredicted RBP25.09■■□□□ 1.61
TNFRSF1B-204ENST00000536782 CSF1RP07333 972 aa25.09■■□□□ 1.61
TNFRSF1B-204ENST00000536782 FAM161AQ3B820 660 aa25.09■■□□□ 1.61
TNFRSF1B-204ENST00000536782 AKAP11Q9UKA4 1901 aa25.09■■□□□ 1.61
TNFRSF1B-204ENST00000536782 ZNF157P51786 506 aaPredicted RBP25.08■■□□□ 1.61
TNFRSF1B-204ENST00000536782 FBXW7Q969H0 707 aa25.08■■□□□ 1.61
TNFRSF1B-204ENST00000536782 PITPNM2Q9BZ72 1349 aa25.08■■□□□ 1.6
TNFRSF1B-204ENST00000536782 CACNA1FO60840 1977 aa25.07■■□□□ 1.6
TNFRSF1B-204ENST00000536782 DACT2Q5SW24 774 aa25.07■■□□□ 1.6
TNFRSF1B-204ENST00000536782 STRIP1Q5VSL9 837 aa25.07■■□□□ 1.6
TNFRSF1B-204ENST00000536782 ZNF804BA4D1E1 1349 aa25.07■■□□□ 1.6
TNFRSF1B-204ENST00000536782 MYO3BQ8WXR4 1341 aa25.07■■□□□ 1.6
TNFRSF1B-204ENST00000536782 TXNRD3Q86VQ6 643 aa25.06■■□□□ 1.6
TNFRSF1B-204ENST00000536782 OGFOD1Q8N543 542 aa25.06■■□□□ 1.6
TNFRSF1B-204ENST00000536782 MXD3Q9BW11 206 aa25.05■■□□□ 1.6
TNFRSF1B-204ENST00000536782 ANKRD18BA2A2Z9 1011 aa25.04■■□□□ 1.6
TNFRSF1B-204ENST00000536782 KCNJ4P48050 445 aa25.04■■□□□ 1.6
TNFRSF1B-204ENST00000536782 KIF23Q02241 960 aaPredicted RBP25.04■■□□□ 1.6
TNFRSF1B-204ENST00000536782 F6X3S4 739 aa25.03■■□□□ 1.6
TNFRSF1B-204ENST00000536782 FKBP1BP68106 108 aa25.03■■□□□ 1.6
TNFRSF1B-204ENST00000536782 CHRNDQ07001 517 aa25.03■■□□□ 1.6
TNFRSF1B-204ENST00000536782 NBPF9Q3BBW0 867 aa25.03■■□□□ 1.6
TNFRSF1B-204ENST00000536782 SPINK5Q9NQ38 1064 aaPredicted RBP25.03■■□□□ 1.6
TNFRSF1B-204ENST00000536782 SLC10A3P09131 477 aa25.02■■□□□ 1.6
TNFRSF1B-204ENST00000536782 KLRK1P26718 216 aa25.02■■□□□ 1.6
TNFRSF1B-204ENST00000536782 MMP14P50281 582 aa25.02■■□□□ 1.6
TNFRSF1B-204ENST00000536782 BEND3Q5T5X7 828 aa25.02■■□□□ 1.6
TNFRSF1B-204ENST00000536782 TTLL5Q6EMB2 1281 aa25.02■■□□□ 1.6
TNFRSF1B-204ENST00000536782 FOXO4P98177 505 aa25.01■■□□□ 1.59
TNFRSF1B-204ENST00000536782 IFIT5Q13325 482 aaKnown RBP25.01■■□□□ 1.59
TNFRSF1B-204ENST00000536782 FAM9BQ8IZU0 186 aa25.01■■□□□ 1.59
TNFRSF1B-204ENST00000536782 MCOLN1Q9GZU1 580 aa25.01■■□□□ 1.59
TNFRSF1B-204ENST00000536782 SAGE1Q9NXZ1 904 aa25.01■■□□□ 1.59
TNFRSF1B-204ENST00000536782 WNT10BO00744 389 aa25■■□□□ 1.59
TNFRSF1B-204ENST00000536782 SCAF8Q9UPN6 1271 aaKnown RBP25■■□□□ 1.59
TNFRSF1B-204ENST00000536782 CHMP3Q9Y3E7 222 aa25■■□□□ 1.59
TNFRSF1B-204ENST00000536782 CCDC85CA6NKD9 419 aa24.99■■□□□ 1.59
TNFRSF1B-204ENST00000536782 GTF2IP78347 998 aa24.99■■□□□ 1.59
TNFRSF1B-204ENST00000536782 HDAC9Q9UKV0 1011 aa24.99■■□□□ 1.59
TNFRSF1B-204ENST00000536782 A0A1B0GUL6 1792 aa24.98■■□□□ 1.59
TNFRSF1B-204ENST00000536782 PAPPA2Q9BXP8 1791 aa24.98■■□□□ 1.59
TNFRSF1B-204ENST00000536782 TNRC18O15417 2968 aaPredicted RBP24.98■■□□□ 1.59
TNFRSF1B-204ENST00000536782 CD209Q9NNX6 404 aa24.98■■□□□ 1.59
TNFRSF1B-204ENST00000536782 TAF5LO75529 589 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 RGS19P49795 217 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 PRAMEF18Q5VWM3 479 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 RASAL3Q86YV0 1011 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 KIAA0825Q8IV33 1275 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 REM2Q8IYK8 340 aaPredicted RBP24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 CSRNP1Q96S65 589 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 RNF186Q9NXI6 227 aa24.97■■□□□ 1.59
TNFRSF1B-204ENST00000536782 GRM8O00222 908 aa24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 TRPA1O75762 1119 aa24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 SASH1O94885 1247 aa24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 DGKZQ13574 1117 aa24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 LMBR1LQ6UX01 489 aa24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 C15orf52Q6ZUT6 534 aaKnown RBP24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 HELBQ8NG08 1087 aaPredicted RBP24.96■■□□□ 1.59
TNFRSF1B-204ENST00000536782 SNAP23O00161 211 aa24.95■■□□□ 1.58
TNFRSF1B-204ENST00000536782 NF2P35240 595 aa24.95■■□□□ 1.58
TNFRSF1B-204ENST00000536782 CCDC57Q2TAC2 916 aa24.95■■□□□ 1.58
TNFRSF1B-204ENST00000536782 MOB2Q70IA6 237 aa24.95■■□□□ 1.58
TNFRSF1B-204ENST00000536782 C9orf78Q9NZ63 289 aaPredicted RBP24.95■■□□□ 1.58
TNFRSF1B-204ENST00000536782 IRS2Q9Y4H2 1338 aa24.94■■□□□ 1.58
TNFRSF1B-204ENST00000536782 TTLL12Q14166 644 aaPredicted RBP24.94■■□□□ 1.58
TNFRSF1B-204ENST00000536782 UBE2Q2LH0YL09 131 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 ALDH1L1O75891 902 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 TAF7LQ5H9L4 462 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 EPHA10Q5JZY3 1008 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 SLC4A10Q6U841 1118 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 ZNF804AQ7Z570 1209 aa24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 APOBEC3FQ8IUX4 373 aaKnown RBP24.93■■□□□ 1.58
TNFRSF1B-204ENST00000536782 LDHAL6AQ6ZMR3 332 aa24.92■■□□□ 1.58
TNFRSF1B-204ENST00000536782 ZBED3Q96IU2 234 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1B-204ENST00000536782 ZNF594Q96JF6 807 aaPredicted RBP24.92■■□□□ 1.58
TNFRSF1B-204ENST00000536782 SRCIN1Q9C0H9 1055 aa24.92■■□□□ 1.58
TNFRSF1B-204ENST00000536782 PDE4DIPQ5VU43 2346 aa24.92■■□□□ 1.58
TNFRSF1B-204ENST00000536782 CNNM1Q9NRU3 951 aa24.91■■□□□ 1.58
TNFRSF1B-204ENST00000536782 IL1R1P14778 569 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms