RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RIPOR2Q9Y4F9 1068 aa16.53■□□□□ 0.24
PRKDC-206ENST00000536429 LRRFIP2Q9Y608 721 aaKnown RBP16.53■□□□□ 0.24
PRKDC-206ENST00000536429 ITGBL1O95965 494 aaPredicted RBP16.52■□□□□ 0.24
PRKDC-206ENST00000536429 EGFRP00533 1210 aa16.52■□□□□ 0.24
PRKDC-206ENST00000536429 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
PRKDC-206ENST00000536429 PODNQ7Z5L7 613 aa16.52■□□□□ 0.24
PRKDC-206ENST00000536429 DPF2Q92785 391 aa16.52■□□□□ 0.24
PRKDC-206ENST00000536429 PASKQ96RG2 1323 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.232e-9■■■■■ 39.9
PRKDC-206ENST00000536429 ZKSCAN2Q63HK3 967 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 RSBN1LQ6PCB5 846 aaPredicted RBP16.51■□□□□ 0.23
PRKDC-206ENST00000536429 SAMD7Q7Z3H4 446 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 TMEM57Q8N5G2 664 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 COA1Q9GZY4 146 aa16.51■□□□□ 0.23
PRKDC-206ENST00000536429 USP17L3A6NCW0 530 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 USP17L4A6NCW7 530 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 RLBP1P12271 317 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 RPS12P25398 132 aaKnown RBP16.5■□□□□ 0.23
PRKDC-206ENST00000536429 TBC1D10BQ4KMP7 808 aaPredicted RBP16.5■□□□□ 0.23
PRKDC-206ENST00000536429 USP17L1Q7RTZ2 530 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 DNAJC5GQ8N7S2 189 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 GMLQ99445 158 aa16.5■□□□□ 0.23
PRKDC-206ENST00000536429 H7C1D1 291 aa16.49■□□□□ 0.23
PRKDC-206ENST00000536429 PTPN12Q05209 780 aaKnown RBP16.49■□□□□ 0.23
PRKDC-206ENST00000536429 DACT2Q5SW24 774 aa16.49■□□□□ 0.23
PRKDC-206ENST00000536429 C15orf52Q6ZUT6 534 aaKnown RBP16.49■□□□□ 0.23
PRKDC-206ENST00000536429 FBXW7Q969H0 707 aa16.49■□□□□ 0.23
PRKDC-206ENST00000536429 CD209Q9NNX6 404 aa16.49■□□□□ 0.23
PRKDC-206ENST00000536429 PCNTO95613 3336 aa16.48■□□□□ 0.23
PRKDC-206ENST00000536429 TRAF5O00463 557 aa16.48■□□□□ 0.23
PRKDC-206ENST00000536429 METTL24Q5JXM2 366 aa16.48■□□□□ 0.23
PRKDC-206ENST00000536429 RBM26Q5T8P6 1007 aaKnown RBP16.48■□□□□ 0.23
PRKDC-206ENST00000536429 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
PRKDC-206ENST00000536429 MROH5Q6ZUA9 1318 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 A0A1B0GUL6 1792 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 GYG1P46976 350 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 GTF2IP78347 998 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 AGBL3Q8NEM8 1001 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 SIL1Q9H173 461 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
PRKDC-206ENST00000536429 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
PRKDC-206ENST00000536429 ASTN2O75129 1339 aaPredicted RBP16.46■□□□□ 0.23
PRKDC-206ENST00000536429 ZNF609O15014 1411 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 EYA2O00167 538 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 GNAI3P08754 354 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 ZNF280AP59817 542 aaPredicted RBP16.46■□□□□ 0.23
PRKDC-206ENST00000536429 UBE4AQ14139 1066 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 STRIP1Q5VSL9 837 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 DLK2Q6UY11 383 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 ATG9AQ7Z3C6 839 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 GLIS2Q9BZE0 524 aaPredicted RBP16.46■□□□□ 0.23
PRKDC-206ENST00000536429 PGAP2Q9UHJ9 254 aa16.46■□□□□ 0.23
PRKDC-206ENST00000536429 KIF4BQ2VIQ3 1234 aa16.45■□□□□ 0.22
PRKDC-206ENST00000536429 TTLL5Q6EMB2 1281 aa16.45■□□□□ 0.22
PRKDC-206ENST00000536429 ZNF804AQ7Z570 1209 aa16.45■□□□□ 0.22
PRKDC-206ENST00000536429 DZIP1LQ8IYY4 767 aaKnown RBP16.45■□□□□ 0.22
PRKDC-206ENST00000536429 FAM84BQ96KN1 310 aaPredicted RBP16.45■□□□□ 0.22
PRKDC-206ENST00000536429 PDE8BO95263 885 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 USP17L8P0C7I0 530 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 IL1R1P14778 569 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 FTSJ3Q8IY81 847 aaKnown RBP16.44■□□□□ 0.22
PRKDC-206ENST00000536429 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 PANK1Q8TE04 598 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
PRKDC-206ENST00000536429 GNAI2P04899 355 aa16.43■□□□□ 0.22
PRKDC-206ENST00000536429 FGFR2P21802 821 aa16.43■□□□□ 0.22
PRKDC-206ENST00000536429 ZC3H15Q8WU90 426 aaKnown RBP16.43■□□□□ 0.22
PRKDC-206ENST00000536429 KLRG1Q96E93 195 aa16.43■□□□□ 0.22
PRKDC-206ENST00000536429 C1orf115Q9H7X2 142 aa16.43■□□□□ 0.22
PRKDC-206ENST00000536429 MYOZ2Q9NPC6 264 aa16.43■□□□□ 0.22
PRKDC-206ENST00000536429 ZNF646O15015 1829 aaPredicted RBP16.42■□□□□ 0.22
PRKDC-206ENST00000536429 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 TMEM88BA6NKF7 163 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 SRGAP3O43295 1099 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 HIBADHP31937 336 aaKnown RBP16.42■□□□□ 0.22
PRKDC-206ENST00000536429 MTX1Q13505 466 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 FBXO33Q7Z6M2 555 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 KIAA0825Q8IV33 1275 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 COPRSQ9NQ92 184 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
PRKDC-206ENST00000536429 HDAC5Q9UQL6 1122 aa16.42■□□□□ 0.22
PRKDC-206ENST00000536429 PSME4Q14997 1843 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 ZBTB7BO15156 539 aaPredicted RBP16.41■□□□□ 0.22
PRKDC-206ENST00000536429 CIAO1O76071 339 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 BCAMP50895 628 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 SCARF1Q14162 830 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 PUM3Q15397 648 aaKnown RBP16.41■□□□□ 0.22
PRKDC-206ENST00000536429 CST9Q5W186 159 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
PRKDC-206ENST00000536429 GGA3Q9NZ52 723 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 MKRN1Q9UHC7 482 aaKnown RBP16.41■□□□□ 0.22
PRKDC-206ENST00000536429 RCAN3Q9UKA8 241 aa16.41■□□□□ 0.22
PRKDC-206ENST00000536429 SCAF8Q9UPN6 1271 aaKnown RBP16.41■□□□□ 0.22
PRKDC-206ENST00000536429 NBPF9Q3BBW0 867 aa16.4■□□□□ 0.22
PRKDC-206ENST00000536429 PCDHAC2Q9Y5I4 1007 aa16.4■□□□□ 0.22
PRKDC-206ENST00000536429 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms