RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 GSK3AP49840 483 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 ANAPC15P60006 121 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 RTF1Q92541 710 aaKnown RBP6.98□□□□□ -1.29
VPS33A-203ENST00000536212 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
VPS33A-203ENST00000536212 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 ZDHHC9Q9Y397 364 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 ANKARQ7Z5J8 1434 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 PXDNLA1KZ92 1463 aa6.98□□□□□ -1.29
VPS33A-203ENST00000536212 USP54Q70EL1 1684 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 FOXO3O43524 673 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 VAC14Q08AM6 782 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 NWD1Q149M9 1564 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 HS1BP3Q53T59 392 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 HDGFL1Q5TGJ6 251 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 CCDC30Q5VVM6 783 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 INTS4Q96HW7 963 aaKnown RBP6.97□□□□□ -1.29
VPS33A-203ENST00000536212 ESYT1Q9BSJ8 1104 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 SRCIN1Q9C0H9 1055 aa6.97□□□□□ -1.29
VPS33A-203ENST00000536212 CEP170BQ9Y4F5 1589 aaPredicted RBP6.97□□□□□ -1.29
VPS33A-203ENST00000536212 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
VPS33A-203ENST00000536212 F6X3S4 739 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 CAPN5O15484 640 aaPredicted RBP6.96□□□□□ -1.3
VPS33A-203ENST00000536212 VSIG8P0DPA2 414 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 JUNDP17535 347 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 CHMLP26374 656 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 NASPP49321 788 aaPredicted RBP6.96□□□□□ -1.3
VPS33A-203ENST00000536212 MCTP1Q6DN14 999 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 ZGPATQ8N5A5 531 aaKnown RBP6.96□□□□□ -1.3
VPS33A-203ENST00000536212 STK31Q9BXU1 1019 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 LRRCC1Q9C099 1032 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 MIS18AQ9NYP9 233 aa6.96□□□□□ -1.3
VPS33A-203ENST00000536212 DIP2AQ14689 1571 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 PNMA6EA0A0J9YXQ4 647 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 GNAT3A8MTJ3 354 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 SIAH2O43255 324 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 RAB11FIP3O75154 756 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 BRD1O95696 1058 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 MX1P20591 662 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 SOX11P35716 441 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 AMPHP49418 695 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 PKP1Q13835 747 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 ZSCAN23Q3MJ62 389 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 IL17REQ8NFR9 667 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 ADAMTS19Q8TE59 1207 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 SSH3Q8TE77 659 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 TRIM44Q96DX7 344 aaPredicted RBP6.95□□□□□ -1.3
VPS33A-203ENST00000536212 TMX3Q96JJ7 454 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 PDLIM2Q96JY6 352 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 AMOTL2Q9Y2J4 779 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 EID1Q9Y6B2 187 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 RIMS1Q86UR5 1692 aaKnown RBP6.95□□□□□ -1.3
VPS33A-203ENST00000536212 TSPOAP1O95153 1857 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 XRN1Q8IZH2 1706 aaKnown RBP6.95□□□□□ -1.3
VPS33A-203ENST00000536212 N4BP2Q86UW6 1770 aaPredicted RBP6.95□□□□□ -1.3
VPS33A-203ENST00000536212 MAP3K5Q99683 1374 aa6.95□□□□□ -1.3
VPS33A-203ENST00000536212 FAM208AQ9UK61 1670 aaKnown RBP6.94□□□□□ -1.3
VPS33A-203ENST00000536212 FMN2Q9NZ56 1722 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 MBD3O95983 291 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 MCCP23508 829 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 HOXC9P31274 260 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 TAF7Q15545 349 aaPredicted RBP6.94□□□□□ -1.3
VPS33A-203ENST00000536212 PTPRNQ16849 979 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 ZSCAN30Q86W11 494 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 GPT2Q8TD30 523 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 USP44Q9H0E7 712 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 RBSNQ9H1K0 784 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 EXOC6BQ9Y2D4 811 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 USP42Q9H9J4 1324 aaKnown RBP6.94□□□□□ -1.3
VPS33A-203ENST00000536212 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
VPS33A-203ENST00000536212 PIK3C2AO00443 1686 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 PRPF40AO75400 957 aaKnown RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 TPM2P07951 284 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 HOXB7P09629 217 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 HSPA4P34932 840 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 NEK4P51957 841 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 TERF1P54274 439 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 FGD1P98174 961 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 CAVIN1Q6NZI2 390 aaKnown RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 LRSAM1Q6UWE0 723 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 NGDNQ8NEJ9 315 aaKnown RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 ANP32BQ92688 251 aaKnown RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 ZFP42Q96MM3 310 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 ALG2Q9H553 416 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 FKBPLQ9UIM3 349 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 MED1Q15648 1581 aaPredicted RBP6.93□□□□□ -1.3
VPS33A-203ENST00000536212 CEMIPQ8WUJ3 1361 aa6.93□□□□□ -1.3
VPS33A-203ENST00000536212 SEMA3FQ13275 785 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 FKBP5Q13451 457 aaPredicted RBP6.92□□□□□ -1.3
VPS33A-203ENST00000536212 TMEM87AQ8NBN3 555 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 NAP1L5Q96NT1 182 aaPredicted RBP6.92□□□□□ -1.3
VPS33A-203ENST00000536212 SLC26A8Q96RN1 970 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 CHMP4AQ9BY43 222 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 TMEM63CQ9P1W3 806 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 PALD1Q9ULE6 856 aa6.92□□□□□ -1.3
VPS33A-203ENST00000536212 LRRFIP2Q9Y608 721 aaKnown RBP6.92□□□□□ -1.3
VPS33A-203ENST00000536212 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
VPS33A-203ENST00000536212 MARF1Q9Y4F3 1742 aaKnown RBP6.92□□□□□ -1.3
VPS33A-203ENST00000536212 ZNF500O60304 480 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms