RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 REM2Q8IYK8 340 aaPredicted RBP16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 MYOZ2Q9NPC6 264 aa16.82■□□□□ 0.28
CLSTN3-205ENST00000535452 ADM5C9JUS6 153 aa16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 FKBP1BP68106 108 aa16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 IFIT5Q13325 482 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 ANGEL2Q5VTE6 544 aaKnown RBP16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 KCNQ5Q9NR82 932 aa16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 MINPP1Q9UNW1 487 aa16.81■□□□□ 0.28
CLSTN3-205ENST00000535452 ZNF804BA4D1E1 1349 aa16.8■□□□□ 0.28
CLSTN3-205ENST00000535452 H7C1W4 665 aa16.8■□□□□ 0.28
CLSTN3-205ENST00000535452 ZNF280AP59817 542 aaPredicted RBP16.8■□□□□ 0.28
CLSTN3-205ENST00000535452 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
CLSTN3-205ENST00000535452 PITPNM2Q9BZ72 1349 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 CCDC57Q2TAC2 916 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 STRIP1Q5VSL9 837 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 CDCA5Q96FF9 252 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 ABHD8Q96I13 439 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 PLA2G12BQ9BX93 195 aa16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 C9orf78Q9NZ63 289 aaPredicted RBP16.79■□□□□ 0.28
CLSTN3-205ENST00000535452 CCDC85CA6NKD9 419 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 MYO1BO43795 1136 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 EXOSC9Q06265 439 aaKnown RBP16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 G2E3Q7L622 706 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 TSKSQ9UJT2 592 aa16.78■□□□□ 0.28
CLSTN3-205ENST00000535452 CCDC184Q52MB2 194 aa16.77■□□□□ 0.28
CLSTN3-205ENST00000535452 ZNF804AQ7Z570 1209 aa16.77■□□□□ 0.28
CLSTN3-205ENST00000535452 ZNF609O15014 1411 aa16.77■□□□□ 0.27
CLSTN3-205ENST00000535452 THSD7BQ9C0I4 1608 aa16.77■□□□□ 0.27
CLSTN3-205ENST00000535452 EGFRP00533 1210 aa16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 SLC4A10Q6U841 1118 aa16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 APOBEC3FQ8IUX4 373 aaKnown RBP16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 CNNM1Q9NRU3 951 aa16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 SAGE1Q9NXZ1 904 aa16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 PCNTO95613 3336 aa16.76■□□□□ 0.27
CLSTN3-205ENST00000535452 VAMP4O75379 141 aa16.75■□□□□ 0.27
CLSTN3-205ENST00000535452 CHRNDQ07001 517 aa16.75■□□□□ 0.27
CLSTN3-205ENST00000535452 MYH3P11055 1940 aa16.74■□□□□ 0.27
CLSTN3-205ENST00000535452 GTF2IP78347 998 aa16.74■□□□□ 0.27
CLSTN3-205ENST00000535452 KIF23Q02241 960 aaPredicted RBP16.74■□□□□ 0.27
CLSTN3-205ENST00000535452 DGKZQ13574 1117 aa16.74■□□□□ 0.27
CLSTN3-205ENST00000535452 ARMC9Q7Z3E5 817 aa16.74■□□□□ 0.27
CLSTN3-205ENST00000535452 CSF1RP07333 972 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 DLGAP5Q15398 846 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 DACT2Q5SW24 774 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 LDHAL6AQ6ZMR3 332 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 KIAA0825Q8IV33 1275 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
CLSTN3-205ENST00000535452 GRM8O00222 908 aa16.72■□□□□ 0.27
CLSTN3-205ENST00000535452 ALDH1L1O75891 902 aa16.72■□□□□ 0.27
CLSTN3-205ENST00000535452 SLC10A3P09131 477 aa16.72■□□□□ 0.27
CLSTN3-205ENST00000535452 PLIN1O60240 522 aa16.71■□□□□ 0.27
CLSTN3-205ENST00000535452 TRPA1O75762 1119 aa16.71■□□□□ 0.27
CLSTN3-205ENST00000535452 RBM5P52756 815 aaKnown RBP eCLIP16.71■□□□□ 0.27
CLSTN3-205ENST00000535452 VPS37DQ86XT2 251 aa16.71■□□□□ 0.27
CLSTN3-205ENST00000535452 GMLQ99445 158 aa16.71■□□□□ 0.27
CLSTN3-205ENST00000535452 CACNA1FO60840 1977 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 F6X3S4 739 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 WNT10BO00744 389 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 SASH1O94885 1247 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 SREBF2Q12772 1141 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 NBPF9Q3BBW0 867 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 BEND3Q5T5X7 828 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 DLK2Q6UY11 383 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 CD209Q9NNX6 404 aa16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 ASTN2O75129 1339 aaPredicted RBP16.7■□□□□ 0.26
CLSTN3-205ENST00000535452 COL4A1P02462 1669 aa16.69■□□□□ 0.26
CLSTN3-205ENST00000535452 SPEF2Q9C093 1822 aa16.69■□□□□ 0.26
CLSTN3-205ENST00000535452 FRAT2O75474 233 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-205ENST00000535452 MLLT1Q03111 559 aaPredicted RBP16.69■□□□□ 0.26
CLSTN3-205ENST00000535452 MCOLN1Q9GZU1 580 aa16.69■□□□□ 0.26
CLSTN3-205ENST00000535452 PPP1R12BO60237 982 aaPredicted RBP16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 TAF5LO75529 589 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 CASP7P55210 303 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 SUPT20HL1Q3ZLR7 823 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 RNF186Q9NXI6 227 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 PAPPA2Q9BXP8 1791 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 SCN9AQ15858 1988 aa16.68■□□□□ 0.26
CLSTN3-205ENST00000535452 FAM155AB1AL88 458 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 F8W031 263 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 RASAL3Q86YV0 1011 aa16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 HELBQ8NG08 1087 aaPredicted RBP16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 MXD3Q9BW11 206 aa16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 PPP2R3BQ9Y5P8 575 aa16.67■□□□□ 0.26
CLSTN3-205ENST00000535452 UBE2Q2LH0YL09 131 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 TXNRD3Q86VQ6 643 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 COL1A1P02452 1464 aaPredicted RBP16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 PSME4Q14997 1843 aa16.66■□□□□ 0.26
CLSTN3-205ENST00000535452 E9PSI1 815 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 FKBP1AP62942 108 aaKnown RBP16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 FOXO4P98177 505 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 PRKG1Q13976 671 aa16.65■□□□□ 0.26
CLSTN3-205ENST00000535452 ZIC5Q96T25 663 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms