RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 LARGE2Q8N3Y3 721 aa11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 JDP2Q8WYK2 163 aa11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 ATP6V0A2Q9Y487 856 aa11.41□□□□□ -0.58
CCDC90B-219ENST00000534753 ZC3H4Q9UPT8 1303 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 BBOX1O75936 387 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 VEGFAP15692 232 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 FLIIQ13045 1269 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 TRIM28Q13263 835 aaKnown RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 GRAPQ13588 217 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 DPP8Q6V1X1 898 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 ZBTB38Q8NAP3 1195 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 CCDC191Q8NCU4 936 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 GRAPLQ8TC17 118 aaPredicted RBP11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 GJA3Q9Y6H8 435 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 LAMB2P55268 1798 aa11.4□□□□□ -0.58
CCDC90B-219ENST00000534753 ZNF541Q9H0D2 1346 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 PPIP5K2O43314 1243 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 AOC3Q16853 763 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 DOK7Q18PE1 504 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 DIEXFQ68CQ4 756 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 SP8Q8IXZ3 490 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 MPNDQ8N594 471 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 CELF1Q92879 486 aaKnown RBP11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 PHOX2BQ99453 314 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 PSMD1Q99460 953 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
CCDC90B-219ENST00000534753 TAF1P21675 1872 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 F6X3S4 739 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 CCER2I3L3R5 266 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 PCCAP05165 728 aaPredicted RBP11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 IGKV5-2P06315 115 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 HSP90B1P14625 803 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 HSPA6P17066 643 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 EIF6P56537 245 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 CDAN1Q8IWY9 1227 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 NIM1KQ8IY84 436 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 NLRP7Q8WX94 980 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 FBXW7Q969H0 707 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 SEC31BQ9NQW1 1179 aa11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 NSFL1CQ9UNZ2 370 aaKnown RBP11.38□□□□□ -0.59
CCDC90B-219ENST00000534753 DICER1Q9UPY3 1922 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 NEURL1BA8MQ27 555 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 C6orf229H3BNL8 230 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 RIMBP2O15034 1052 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 PDE8AO60658 829 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 CCDC152Q4G0S7 254 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 EAPPQ56P03 285 aaPredicted RBP11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 GPR153Q6NV75 609 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 SLC4A10Q6U841 1118 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 UBE3BQ7Z3V4 1068 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 SUPT20HQ8NEM7 779 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 DNAAF4Q8WXU2 420 aa11.37□□□□□ -0.59
CCDC90B-219ENST00000534753 POTECB2RU33 542 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 RPS8P62241 208 aaKnown RBP11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 C6orf132Q5T0Z8 1188 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 SMC1BQ8NDV3 1235 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 ZDHHC16Q969W1 377 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 CDCA7LQ96GN5 454 aa11.36□□□□□ -0.59
CCDC90B-219ENST00000534753 E9PSI1 815 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 FZD9O00144 591 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 MS4A1P11836 297 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 GPSM2P81274 684 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 HTRA3P83110 453 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 GCKRQ14397 625 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 GPR101Q96P66 508 aaPredicted RBP11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 BCL2L13Q9BXK5 485 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 ANKIB1Q9P2G1 1089 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 ZNF521Q96K83 1311 aa11.35□□□□□ -0.59
CCDC90B-219ENST00000534753 COL4A5P29400 1685 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 IQCA1LA6NCM1 817 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 CTSWP56202 376 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 MDM2Q00987 491 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 FSTL1Q12841 308 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 ANKRD18AQ8IVF6 992 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 HACL1Q9UJ83 578 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 CHMP3Q9Y3E7 222 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 SNED1Q8TER0 1413 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 CDHR2Q9BYE9 1310 aa11.34□□□□□ -0.59
CCDC90B-219ENST00000534753 COL4A1P02462 1669 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 WDR90Q96KV7 1748 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 RAD17O75943 681 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 APLP1P51693 650 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 SLFN5Q08AF3 891 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 GPC2Q8N158 579 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 LINS1Q8NG48 757 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 GREM2Q9H772 168 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 ZNRF3Q9ULT6 936 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 LHX6Q9UPM6 363 aa11.33□□□□□ -0.6
CCDC90B-219ENST00000534753 H7C1W4 665 aa11.32□□□□□ -0.6
CCDC90B-219ENST00000534753 UFL1O94874 794 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms