RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 SNX14Q9Y5W7 946 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 PHKG2P15735 406 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 IFIT1BQ5T764 474 aaKnown RBP19.82■□□□□ 0.76
PHRF1-206ENST00000534320 MAGEB6Q8N7X4 407 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 ZNF219Q9P2Y4 722 aaPredicted RBP19.82■□□□□ 0.76
PHRF1-206ENST00000534320 ITGA6P23229 1130 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 ODF2Q5BJF6 829 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 MAGEB6P1A0A0J9YX57 407 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 GSPT1P15170 499 aaKnown RBP19.82■□□□□ 0.76
PHRF1-206ENST00000534320 SYCP1Q15431 976 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 TXLNBQ8N3L3 684 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 DACT1Q9NYF0 836 aa19.82■□□□□ 0.76
PHRF1-206ENST00000534320 SYT1P21579 422 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 FAM227BQ96M60 508 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 LMTK3Q96Q04 1460 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 ERLIN2O94905 339 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 PTPN14Q15678 1187 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 NEURL1BA8MQ27 555 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 SLC27A2O14975 620 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 TMEM266Q2M3C6 531 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 ZNF594Q96JF6 807 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-206ENST00000534320 CGNQ9P2M7 1197 aaKnown RBP19.81■□□□□ 0.76
PHRF1-206ENST00000534320 RTCBQ9Y3I0 505 aaKnown RBP19.81■□□□□ 0.76
PHRF1-206ENST00000534320 KIF2AO00139 706 aaPredicted RBP19.81■□□□□ 0.76
PHRF1-206ENST00000534320 CCDC129Q6ZRS4 1044 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 STX8Q9UNK0 236 aa19.81■□□□□ 0.76
PHRF1-206ENST00000534320 CDK12Q9NYV4 1490 aaPredicted RBP19.8■□□□□ 0.76
PHRF1-206ENST00000534320 PTPDC1A2A3K4 754 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 SYKP43405 635 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 MRPS27Q92552 414 aaKnown RBP19.8■□□□□ 0.76
PHRF1-206ENST00000534320 ZNF853P0CG23 659 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 RPS6KB1P23443 525 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 PRDM10Q9NQV6 1147 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 ERVV-2B6SEH9 535 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 CBX1P83916 185 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 VAT1LQ9HCJ6 419 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 KDRP35968 1356 aa19.8■□□□□ 0.76
PHRF1-206ENST00000534320 LRRIQ1Q96JM4 1722 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 ARHGAP29Q52LW3 1261 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 KANK3Q6NY19 840 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 DNAJC10Q8IXB1 793 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 MIGA1Q8NAN2 632 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 SH3TC1Q8TE82 1336 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 NEMFO60524 1076 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 TMEM132AQ24JP5 1023 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 BEND3Q5T5X7 828 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 CENPHQ9H3R5 247 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 ZFYVE27Q5T4F4 411 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 XAGE2Q96GT9 111 aa19.79■□□□□ 0.76
PHRF1-206ENST00000534320 PRIM1P49642 420 aaKnown RBP19.78■□□□□ 0.76
PHRF1-206ENST00000534320 PARP10Q53GL7 1025 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 ZSCAN12O43309 604 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 ISM2Q6H9L7 571 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 MADDQ8WXG6 1647 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 PDE8AO60658 829 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 TSPY3P0CV98 308 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 TSPY8P0CW00 308 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 HLA-DOAP06340 250 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 GSDMDP57764 484 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 ARHGEF25Q86VW2 580 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 ZNF622Q969S3 477 aaKnown RBP eCLIP19.78■□□□□ 0.763e-7■■■■□ 25.2
PHRF1-206ENST00000534320 TCP11L1Q9NUJ3 509 aa19.78■□□□□ 0.76
PHRF1-206ENST00000534320 A2ML1A8K2U0 1454 aa19.77■□□□□ 0.76
PHRF1-206ENST00000534320 ANO6Q4KMQ2 910 aa19.77■□□□□ 0.76
PHRF1-206ENST00000534320 CCDC178Q5BJE1 867 aa19.77■□□□□ 0.76
PHRF1-206ENST00000534320 FAM200AQ8TCP9 573 aa19.77■□□□□ 0.76
PHRF1-206ENST00000534320 KBTBD3Q8NAB2 608 aa19.77■□□□□ 0.76
PHRF1-206ENST00000534320 PYM1Q9BRP8 204 aaKnown RBP19.77■□□□□ 0.76
PHRF1-206ENST00000534320 TMCO3Q6UWJ1 677 aa19.77■□□□□ 0.75
PHRF1-206ENST00000534320 ZNF804AQ7Z570 1209 aa19.77■□□□□ 0.75
PHRF1-206ENST00000534320 NPHP4O75161 1426 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-206ENST00000534320 UBXN4Q92575 508 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 FAM107BQ9H098 131 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 GLI2P10070 1586 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 ZNF397Q8NF99 534 aaPredicted RBP19.76■□□□□ 0.75
PHRF1-206ENST00000534320 UBA7P41226 1012 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 TMC6Q7Z403 805 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 HSPA4P34932 840 aa19.76■□□□□ 0.75
PHRF1-206ENST00000534320 PUM3Q15397 648 aaKnown RBP19.76■□□□□ 0.75
PHRF1-206ENST00000534320 BMP15O95972 392 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 CCDC181Q5TID7 509 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 ANKRD2Q9GZV1 360 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 TMEM94Q12767 1356 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 NEFHP12036 1026 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 KIAA1328Q86T90 577 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 IBTKQ9P2D0 1353 aaPredicted RBP19.75■□□□□ 0.75
PHRF1-206ENST00000534320 MARCKSP29966 332 aaPredicted RBP19.75■□□□□ 0.75
PHRF1-206ENST00000534320 FKBP15Q5T1M5 1219 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 CCDC102AQ96A19 550 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 SPTLC2O15270 562 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 MBD4O95243 580 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 CUL5Q93034 780 aa19.75■□□□□ 0.75
PHRF1-206ENST00000534320 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 KIF18AQ8NI77 898 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 TSG101Q99816 390 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 E9PCH4 1651 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 APPBP2Q92624 585 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 GNAQP50148 359 aa19.74■□□□□ 0.75
PHRF1-206ENST00000534320 CALML4Q96GE6 196 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms