RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 CST9Q5W186 159 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 SLC4A10Q6U841 1118 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 MCOLN1Q9GZU1 580 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 TLL2Q9Y6L7 1015 aa17.82■□□□□ 0.44
SF3B2-215ENST00000534307 ANKRD18BA2A2Z9 1011 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 H7C1D1 291 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 LMBR1LQ6UX01 489 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 PODNQ7Z5L7 613 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 KAZALD1Q96I82 304 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 MPHOSPH8Q99549 860 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 LEMD3Q9Y2U8 911 aa17.81■□□□□ 0.44
SF3B2-215ENST00000534307 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 CHRNDQ07001 517 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 IFIT5Q13325 482 aaKnown RBP17.8■□□□□ 0.44
SF3B2-215ENST00000534307 ALDH1L2Q3SY69 923 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 SAMD7Q7Z3H4 446 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 TXNRD3Q86VQ6 643 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 GMLQ99445 158 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 ANKRD2Q9GZV1 360 aa17.8■□□□□ 0.44
SF3B2-215ENST00000534307 C9orf78Q9NZ63 289 aaPredicted RBP17.8■□□□□ 0.44
SF3B2-215ENST00000534307 ZNF804BA4D1E1 1349 aa17.79■□□□□ 0.44
SF3B2-215ENST00000534307 G3V3G9 751 aa17.79■□□□□ 0.44
SF3B2-215ENST00000534307 NBPF7P0C2Y1 421 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-215ENST00000534307 KLRK1P26718 216 aa17.79■□□□□ 0.44
SF3B2-215ENST00000534307 ZNF280AP59817 542 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-215ENST00000534307 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
SF3B2-215ENST00000534307 RSBN1LQ6PCB5 846 aaPredicted RBP17.79■□□□□ 0.44
SF3B2-215ENST00000534307 SUCLG2Q96I99 432 aa17.79■□□□□ 0.44
SF3B2-215ENST00000534307 CT47B1P0C2W7 299 aaPredicted RBP17.78■□□□□ 0.44
SF3B2-215ENST00000534307 MAP2K2P36507 400 aa17.78■□□□□ 0.44
SF3B2-215ENST00000534307 TBC1D10BQ4KMP7 808 aaPredicted RBP17.78■□□□□ 0.44
SF3B2-215ENST00000534307 AGBL3Q8NEM8 1001 aa17.78■□□□□ 0.44
SF3B2-215ENST00000534307 GLIS2Q9BZE0 524 aaPredicted RBP17.78■□□□□ 0.44
SF3B2-215ENST00000534307 COA1Q9GZY4 146 aa17.78■□□□□ 0.44
SF3B2-215ENST00000534307 USP17L3A6NCW0 530 aa17.77■□□□□ 0.44
SF3B2-215ENST00000534307 USP17L4A6NCW7 530 aa17.77■□□□□ 0.44
SF3B2-215ENST00000534307 USP17L1Q7RTZ2 530 aa17.77■□□□□ 0.44
SF3B2-215ENST00000534307 CHMP3Q9Y3E7 222 aa17.77■□□□□ 0.44
SF3B2-215ENST00000534307 POLR2AP24928 1970 aaKnown RBP17.77■□□□□ 0.43
SF3B2-215ENST00000534307 AKAP11Q9UKA4 1901 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 CCDC57Q2TAC2 916 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 RABL6Q3YEC7 729 aaPredicted RBP17.76■□□□□ 0.43
SF3B2-215ENST00000534307 DACT2Q5SW24 774 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 C15orf52Q6ZUT6 534 aaKnown RBP17.76■□□□□ 0.43
SF3B2-215ENST00000534307 CDC37L1Q7L3B6 337 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 SMC4Q9NTJ3 1288 aa17.76■□□□□ 0.43
SF3B2-215ENST00000534307 SNAP23O00161 211 aa17.75■□□□□ 0.43
SF3B2-215ENST00000534307 CA12O43570 354 aa17.75■□□□□ 0.43
SF3B2-215ENST00000534307 BRPF1P55201 1214 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-215ENST00000534307 SAPCD2Q86UD0 394 aa17.75■□□□□ 0.43
SF3B2-215ENST00000534307 ANKRD44Q8N8A2 993 aa17.75■□□□□ 0.43
SF3B2-215ENST00000534307 ZNF594Q96JF6 807 aaPredicted RBP17.75■□□□□ 0.43
SF3B2-215ENST00000534307 TAF5LO75529 589 aa17.74■□□□□ 0.43
SF3B2-215ENST00000534307 STRIP1Q5VSL9 837 aa17.74■□□□□ 0.43
SF3B2-215ENST00000534307 MIER1Q8N108 512 aa17.74■□□□□ 0.43
SF3B2-215ENST00000534307 HELBQ8NG08 1087 aaPredicted RBP17.74■□□□□ 0.43
SF3B2-215ENST00000534307 USP44Q9H0E7 712 aa17.74■□□□□ 0.43
SF3B2-215ENST00000534307 BICC1Q9H694 974 aaKnown RBP17.74■□□□□ 0.43
SF3B2-215ENST00000534307 CELF2O95319 508 aaKnown RBP17.73■□□□□ 0.43
SF3B2-215ENST00000534307 USP17L8P0C7I0 530 aa17.73■□□□□ 0.43
SF3B2-215ENST00000534307 DGKZQ13574 1117 aa17.73■□□□□ 0.43
SF3B2-215ENST00000534307 RBM26Q5T8P6 1007 aaKnown RBP17.73■□□□□ 0.43
SF3B2-215ENST00000534307 DIEXFQ68CQ4 756 aaKnown RBP17.73■□□□□ 0.43
SF3B2-215ENST00000534307 LDHAL6AQ6ZMR3 332 aa17.73■□□□□ 0.43
SF3B2-215ENST00000534307 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
SF3B2-215ENST00000534307 MXD3Q9BW11 206 aa17.73■□□□□ 0.43
SF3B2-215ENST00000534307 ASTN2O75129 1339 aaPredicted RBP17.72■□□□□ 0.43
SF3B2-215ENST00000534307 KCNJ4P48050 445 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 DLK2Q6UY11 383 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 KRT26Q7Z3Y9 468 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 HHIPL1Q96JK4 782 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 GGA3Q9NZ52 723 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 MYO3BQ8WXR4 1341 aa17.72■□□□□ 0.43
SF3B2-215ENST00000534307 RARSP54136 660 aaKnown RBP17.71■□□□□ 0.43
SF3B2-215ENST00000534307 TAF7LQ5H9L4 462 aa17.71■□□□□ 0.43
SF3B2-215ENST00000534307 PUS3Q9BZE2 481 aaKnown RBP17.71■□□□□ 0.43
SF3B2-215ENST00000534307 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
SF3B2-215ENST00000534307 MYOZ2Q9NPC6 264 aa17.71■□□□□ 0.43
SF3B2-215ENST00000534307 RIPOR2Q9Y4F9 1068 aa17.71■□□□□ 0.43
SF3B2-215ENST00000534307 ADM5C9JUS6 153 aa17.7■□□□□ 0.42
SF3B2-215ENST00000534307 IL1R1P14778 569 aa17.7■□□□□ 0.42
SF3B2-215ENST00000534307 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
SF3B2-215ENST00000534307 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
SF3B2-215ENST00000534307 CNNM1Q9NRU3 951 aa17.7■□□□□ 0.42
SF3B2-215ENST00000534307 NOB1Q9ULX3 412 aaKnown RBP17.7■□□□□ 0.42
SF3B2-215ENST00000534307 MKI67P46013 3256 aaKnown RBP17.7■□□□□ 0.42
SF3B2-215ENST00000534307 SCARF1Q14162 830 aa17.69■□□□□ 0.42
SF3B2-215ENST00000534307 ZIC5Q96T25 663 aa17.69■□□□□ 0.42
SF3B2-215ENST00000534307 PITPNM2Q9BZ72 1349 aa17.69■□□□□ 0.42
SF3B2-215ENST00000534307 MMP14P50281 582 aa17.68■□□□□ 0.42
SF3B2-215ENST00000534307 GTF2IP78347 998 aa17.68■□□□□ 0.42
SF3B2-215ENST00000534307 ANGEL2Q5VTE6 544 aaKnown RBP17.68■□□□□ 0.42
SF3B2-215ENST00000534307 ZNF408Q9H9D4 720 aa17.68■□□□□ 0.42
SF3B2-215ENST00000534307 PLIN1O60240 522 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 UBE4AQ14139 1066 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 ZNF804AQ7Z570 1209 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 SULF1Q8IWU6 871 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 CERS5Q8N5B7 392 aa17.67■□□□□ 0.42
SF3B2-215ENST00000534307 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms