RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, human

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP4A-208	ENST00000534106	TPRN	Q4KMQ1	711 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZNF326	Q5BKZ1	582 aa	Known RBP	4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	WWC1	Q8IX03	1113 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	L3MBTL2	Q969R5	705 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	CAMKK2	Q96RR4	588 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	STRN4	Q9NRL3	753 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	CHMP3	Q9Y3E7	222 aa		4.65	□□□□□ -1.67
CHMP4A-208	ENST00000534106	DUOX2	Q9NRD8	1548 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PIK3CD	O00329	1044 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NOS2	P35228	1153 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	C1QTNF8	P60827	252 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TBCEL	Q5QJ74	424 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SAMD5	Q5TGI4	173 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	RHPN1	Q8TCX5	695 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NACC1	Q96RE7	527 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PDGFD	Q9GZP0	370 aa	Predicted RBP	4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZNF358	Q9NW07	568 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	HCN2	Q9UL51	889 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PCDHGA11	Q9Y5H2	935 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	CHD2	O14647	1828 aa	Known RBP	4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ARHGEF5	Q12774	1597 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PIK3R4	Q99570	1358 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ROBO2	Q9HCK4	1378 aa		4.64	□□□□□ -1.67
CHMP4A-208	ENST00000534106	MYOM3	Q5VTT5	1437 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	MYOM2	P54296	1465 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ADGRB3	O60242	1522 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	EHBP1L1	Q8N3D4	1523 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	LOC105371045	A0A1W2PR82	267 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	FAM229A	H3BQW9	127 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106		M0R082	166 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	LZTS3	O60299	673 aa	Predicted RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PRKCSH	P14314	528 aa	Predicted RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TBC1D8B	Q0IIM8	1120 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SFSWAP	Q12872	951 aa	Known RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	KRT28	Q7Z3Y7	464 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	WAPL	Q7Z5K2	1190 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZNF417	Q8TAU3	575 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SCHIP1	Q9P0W5	487 aa	Predicted RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ERBIN	Q96RT1	1412 aa		4.63	□□□□□ -1.67
CHMP4A-208	ENST00000534106	GLI3	P10071	1580 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SERTM1	A2A2V5	107 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	EFS	O43281	561 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	KCNQ2	O43526	872 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SIN3B	O75182	1162 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NCOA4	Q13772	614 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TEAD4	Q15561	434 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TRAPPC3L	Q5T215	181 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	RAB44	Q7Z6P3	723 aa	Predicted RBP	4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SLC9A9	Q8IVB4	645 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TNS4	Q8IZW8	715 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	DEPDC4	Q8N2C3	294 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	CEP63	Q96MT8	703 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PSMG3-AS1	Q96PY0	264 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	IGFLR1	Q9H665	355 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	STK26	Q9P289	416 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	DCC	P43146	1447 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	LMTK2	Q8IWU2	1503 aa		4.62	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SFI1	A8K8P3	1242 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SPEM2	Q0P670	501 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	GRIK4	Q16099	956 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	RSPO4	Q2I0M5	234 aa	Predicted RBP	4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	C8orf86	Q6ZUL3	223 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZNF295-AS1	Q8N0V1	137 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZDHHC1	Q8WTX9	485 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SLC30A3	Q99726	388 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SPON1	Q9HCB6	807 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	BRD7	Q9NPI1	651 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TPSG1	Q9NRR2	321 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	BTG4	Q9NY30	223 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ANKIB1	Q9P2G1	1089 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	HCN4	Q9Y3Q4	1203 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	RBM19	Q9Y4C8	960 aa	Known RBP	4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SPATA31A3	Q5VYP0	1347 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NPHP3	Q7Z494	1330 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ANKRD30A	Q9BXX3	1397 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TRPM2	O94759	1503 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	SLIT2	O94813	1529 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	LRP5	O75197	1615 aa		4.61	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ADARB2-AS1	A8MUL3	147 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	EML1	O00423	815 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ZBTB7A	O95365	584 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ALB	P02768	609 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ITGB7	P26010	798 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	ADH7	P40394	386 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	FAM50A	Q14320	339 aa	Known RBP	4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	PTF1A	Q7RTS3	328 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NBPF11	Q86T75	865 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TRIM50	Q86XT4	487 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	MICALL1	Q8N3F8	863 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TNFRSF25	Q93038	417 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	BHMT	Q93088	406 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	UBE2O	Q9C0C9	1292 aa	Known RBP	4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	KCNH4	Q9UQ05	1017 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	DAPK1	P53355	1430 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	TMEM131L	A2VDJ0	1609 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	NHSL1	Q5SYE7	1610 aa		4.6	□□□□□ -1.67
CHMP4A-208	ENST00000534106	EIF2AK4	Q9P2K8	1649 aa	Known RBP	4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms