RNA–Protein interactions for RNA: ENST00000533928.1

USP33-218, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 606 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-218ENST00000533928 PLEKHM2Q8IWE5 1019 aa6.32□□□□□ -1.4
USP33-218ENST00000533928 KIAA1024Q9UPX6 916 aa6.32□□□□□ -1.4
USP33-218ENST00000533928 HCN4Q9Y3Q4 1203 aa6.32□□□□□ -1.4
USP33-218ENST00000533928 MYO5BQ9ULV0 1848 aa6.32□□□□□ -1.4
USP33-218ENST00000533928 M0R082 166 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 PSMA6P60900 246 aaKnown RBP6.31□□□□□ -1.4
USP33-218ENST00000533928 CLDN10P78369 228 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 SPEM2Q0P670 501 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 C1orf53Q5VUE5 145 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 ZNF417Q8TAU3 575 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 TNFRSF25Q93038 417 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 ZNF587Q96SQ5 575 aaPredicted RBP6.31□□□□□ -1.4
USP33-218ENST00000533928 TSPAN10Q9H1Z9 355 aaPredicted RBP6.31□□□□□ -1.4
USP33-218ENST00000533928 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 CHMP3Q9Y3E7 222 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 STARD13Q9Y3M8 1113 aa6.31□□□□□ -1.4
USP33-218ENST00000533928 CHD2O14647 1828 aaKnown RBP6.31□□□□□ -1.4
USP33-218ENST00000533928 RPGRIP1LQ68CZ1 1315 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 LAMC1P11047 1609 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 SFI1A8K8P3 1242 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 APBA3O96018 575 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 ITGB7P26010 798 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 NEUROD1Q13562 356 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 IDI1Q13907 227 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 MICALL1Q8N3F8 863 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 FNBP4Q8N3X1 1017 aaPredicted RBP6.3□□□□□ -1.4
USP33-218ENST00000533928 GLMNQ92990 594 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 CEP63Q96MT8 703 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 PHACTR1Q9C0D0 580 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 BRD7Q9NPI1 651 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 DCCP43146 1447 aa6.3□□□□□ -1.4
USP33-218ENST00000533928 CLTCL1P53675 1640 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 ALBP02768 609 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 ADH7P40394 386 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 HIRAP54198 1017 aaPredicted RBP6.29□□□□□ -1.4
USP33-218ENST00000533928 TRIM28Q13263 835 aaKnown RBP6.29□□□□□ -1.4
USP33-218ENST00000533928 COL9A3Q14050 684 aaPredicted RBP6.29□□□□□ -1.4
USP33-218ENST00000533928 C8orf86Q6ZUL3 223 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 RAB44Q7Z6P3 723 aaPredicted RBP6.29□□□□□ -1.4
USP33-218ENST00000533928 LARGE2Q8N3Y3 721 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 OGFOD1Q8N543 542 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 ZNF280CQ8ND82 737 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 HSH2DQ96JZ2 352 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 SETD5Q9C0A6 1442 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 PRDM6Q9NQX0 595 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 MKRN1Q9UHC7 482 aaKnown RBP6.29□□□□□ -1.4
USP33-218ENST00000533928 RIMS2Q9UQ26 1411 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 NEXMIFQ5QGS0 1516 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 PPLO60437 1756 aa6.29□□□□□ -1.4
USP33-218ENST00000533928 XRN1Q8IZH2 1706 aaKnown RBP6.28□□□□□ -1.4
USP33-218ENST00000533928 IFT172Q9UG01 1749 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 PALM3A6NDB9 673 aaPredicted RBP6.28□□□□□ -1.4
USP33-218ENST00000533928 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.28□□□□□ -1.4
USP33-218ENST00000533928 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 M0R2N6 131 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 KCNQ4P56696 695 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 POTEAQ6S8J7 498 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 ZNF594Q96JF6 807 aaPredicted RBP6.28□□□□□ -1.4
USP33-218ENST00000533928 SUSD3Q96L08 255 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 KCNH4Q9UQ05 1017 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 TBX22Q9Y458 520 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 LRRC7Q96NW7 1537 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 ANKRD30BQ9BXX2 1392 aa6.28□□□□□ -1.4
USP33-218ENST00000533928 CCDC144AA2RUR9 1427 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 PTCH1Q13635 1447 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 STRCP1A6NGW2 1772 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 PPP1R12BO60237 982 aaPredicted RBP6.27□□□□□ -1.41
USP33-218ENST00000533928 TXNDC2Q86VQ3 553 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 TSEN2Q8NCE0 465 aaKnown RBP6.27□□□□□ -1.41
USP33-218ENST00000533928 TFIP11Q9UBB9 837 aaKnown RBP6.27□□□□□ -1.41
USP33-218ENST00000533928 RBM19Q9Y4C8 960 aaKnown RBP6.27□□□□□ -1.41
USP33-218ENST00000533928 NRXN3Q9Y4C0 1643 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 MYOM2P54296 1465 aa6.27□□□□□ -1.41
USP33-218ENST00000533928 SETD1AO15047 1707 aaKnown RBP6.26□□□□□ -1.41
USP33-218ENST00000533928 KNDC1Q76NI1 1749 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 TOM1O60784 492 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 KCNA6P17658 529 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 TYRO3Q06418 890 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 RSPO4Q2I0M5 234 aaPredicted RBP6.26□□□□□ -1.41
USP33-218ENST00000533928 SIX5Q8N196 739 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 TPSG1Q9NRR2 321 aa6.26□□□□□ -1.41
USP33-218ENST00000533928 MAFBQ9Y5Q3 323 aaPredicted RBP6.26□□□□□ -1.41
USP33-218ENST00000533928 XIRP1Q702N8 1843 aaKnown RBP6.26□□□□□ -1.41
USP33-218ENST00000533928 ZNF335Q9H4Z2 1342 aaPredicted RBP6.25□□□□□ -1.41
USP33-218ENST00000533928 ADAMTS13Q76LX8 1427 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 ALKQ9UM73 1620 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 C21orf2O43822 256 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 DKK1O94907 266 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 NID1P14543 1247 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 RASA1P20936 1047 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 GRIK4Q16099 956 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 NKAPLQ5M9Q1 402 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 ZMYM1Q5SVZ6 1142 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 TRAPPC3LQ5T215 181 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 C20orf204Q6ZNR8 217 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 ALDH16A1Q8IZ83 802 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 BHMTQ93088 406 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 NACC1Q96RE7 527 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 ATAD2Q6PL18 1390 aa6.25□□□□□ -1.41
USP33-218ENST00000533928 TECPR2O15040 1411 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms