RNA–Protein interactions for RNA: ENST00000533674.1

BEST3-207, Transcript of bestrophin 3, humanhuman

TSL 3

Gene BEST3, Length 670 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-207ENST00000533674 DCPSQ96C86 337 aaKnown RBP11.78□□□□□ -0.52
BEST3-207ENST00000533674 NSFL1CQ9UNZ2 370 aaKnown RBP11.78□□□□□ -0.52
BEST3-207ENST00000533674 LAS1LQ9Y4W2 734 aaKnown RBP11.78□□□□□ -0.52
BEST3-207ENST00000533674 PCDHGA4Q9Y5G9 962 aa11.78□□□□□ -0.52
BEST3-207ENST00000533674 HIRAP54198 1017 aaPredicted RBP11.77□□□□□ -0.53
BEST3-207ENST00000533674 TCIRG1Q13488 830 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 RBM26Q5T8P6 1007 aaKnown RBP11.77□□□□□ -0.53
BEST3-207ENST00000533674 KRT26Q7Z3Y9 468 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 C2orf69Q8N8R5 385 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 DBNDD1Q9H9R9 158 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 PLSCR2Q9NRY7 297 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 BABAM1Q9NWV8 329 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 PGAP2Q9UHJ9 254 aa11.77□□□□□ -0.53
BEST3-207ENST00000533674 YDJCA8MPS7 323 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 PSMD14O00487 310 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 PDE4AP27815 886 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 TBC1D10BQ4KMP7 808 aaPredicted RBP11.76□□□□□ -0.53
BEST3-207ENST00000533674 SAMD7Q7Z3H4 446 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 LRP10Q7Z4F1 713 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 EYA3Q99504 573 aa11.76□□□□□ -0.53
BEST3-207ENST00000533674 LRRC37AA6NMS7 1700 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 DDX60Q8IY21 1712 aaKnown RBP11.75□□□□□ -0.53
BEST3-207ENST00000533674 TAF1P21675 1872 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 SHTN1A0MZ66 631 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 VARS2Q5ST30 1063 aaKnown RBP11.75□□□□□ -0.53
BEST3-207ENST00000533674 HDGFL1Q5TGJ6 251 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 RGMBQ6NW40 437 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 PTCD2Q8WV60 388 aaKnown RBP11.75□□□□□ -0.53
BEST3-207ENST00000533674 DPF2Q92785 391 aa11.75□□□□□ -0.53
BEST3-207ENST00000533674 GBA2Q9HCG7 927 aaPredicted RBP11.75□□□□□ -0.53
BEST3-207ENST00000533674 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.75□□□□□ -0.53
BEST3-207ENST00000533674 ECE2O60344 883 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 RPS12P25398 132 aaKnown RBP11.74□□□□□ -0.53
BEST3-207ENST00000533674 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
BEST3-207ENST00000533674 RGS19P49795 217 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 ZNF157P51786 506 aaPredicted RBP11.74□□□□□ -0.53
BEST3-207ENST00000533674 RTL5Q5HYW3 569 aaPredicted RBP11.74□□□□□ -0.53
BEST3-207ENST00000533674 SULF1Q8IWU6 871 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 CCDC102AQ96A19 550 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 FAM89AQ96GI7 184 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 CHPF2Q9P2E5 772 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 CASP8AP2Q9UKL3 1982 aa11.74□□□□□ -0.53
BEST3-207ENST00000533674 ADM5C9JUS6 153 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 KIF4BQ2VIQ3 1234 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 PPP1R15BQ5SWA1 713 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 ANKRD13DQ6ZTN6 518 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 PLBD2Q8NHP8 589 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 CELF1Q92879 486 aaKnown RBP11.73□□□□□ -0.53
BEST3-207ENST00000533674 ZC3H12CQ9C0D7 883 aaKnown RBP11.73□□□□□ -0.53
BEST3-207ENST00000533674 ANKIB1Q9P2G1 1089 aa11.73□□□□□ -0.53
BEST3-207ENST00000533674 ZNF316A6NFI3 1004 aaPredicted RBP11.72□□□□□ -0.53
BEST3-207ENST00000533674 ATP5J2-PTCD1G3V325 749 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 NUDT7P0C024 238 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
BEST3-207ENST00000533674 GPSM2P81274 684 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 DLK2Q6UY11 383 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 CCDC146Q8IYE0 955 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 SPRYD3Q8NCJ5 442 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 ZIC5Q96T25 663 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 SAGE1Q9NXZ1 904 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 GGA3Q9NZ52 723 aa11.72□□□□□ -0.53
BEST3-207ENST00000533674 DBF4Q9UBU7 674 aaPredicted RBP11.72□□□□□ -0.53
BEST3-207ENST00000533674 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
BEST3-207ENST00000533674 TRPA1O75762 1119 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 UFL1O94874 794 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 KIF23Q02241 960 aaPredicted RBP11.71□□□□□ -0.53
BEST3-207ENST00000533674 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
BEST3-207ENST00000533674 RALBP1Q15311 655 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 SF3B3Q15393 1217 aaKnown RBP11.71□□□□□ -0.53
BEST3-207ENST00000533674 KRT24Q2M2I5 525 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 KRTAP3-3Q9BYR6 98 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 KRTAP3-2Q9BYR7 98 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 HYPKQ9NX55 129 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 POLLQ9UGP5 575 aa11.71□□□□□ -0.53
BEST3-207ENST00000533674 EGFRP00533 1210 aa11.7□□□□□ -0.54
BEST3-207ENST00000533674 RPS8P62241 208 aaKnown RBP11.7□□□□□ -0.54
BEST3-207ENST00000533674 MFSD10Q14728 455 aa11.7□□□□□ -0.54
BEST3-207ENST00000533674 RIC3Q7Z5B4 369 aa11.7□□□□□ -0.54
BEST3-207ENST00000533674 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
BEST3-207ENST00000533674 FAM155AB1AL88 458 aaPredicted RBP11.69□□□□□ -0.54
BEST3-207ENST00000533674 CHL1O00533 1208 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 HOXB7P09629 217 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 SOX10P56693 466 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 LARP6Q9BRS8 491 aaKnown RBP11.69□□□□□ -0.54
BEST3-207ENST00000533674 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 KCNQ5Q9NR82 932 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 RNF186Q9NXI6 227 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
BEST3-207ENST00000533674 RTL9Q8NET4 1388 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 AKAP11Q9UKA4 1901 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 SLC10A3P09131 477 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 CCDC152Q4G0S7 254 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 ANGEL2Q5VTE6 544 aaKnown RBP11.68□□□□□ -0.54
BEST3-207ENST00000533674 RUNDC1Q96C34 613 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 CDCA5Q96FF9 252 aa11.68□□□□□ -0.54
BEST3-207ENST00000533674 DDX27Q96GQ7 796 aaKnown RBP11.68□□□□□ -0.54
BEST3-207ENST00000533674 VIL1P09327 827 aaKnown RBP11.67□□□□□ -0.54
BEST3-207ENST00000533674 SCARF1Q14162 830 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms