RNA–Protein interactions for RNA: ENST00000533232.5

SOX9-AS1-212, SOX9 antisense RNA 1, humanhuman

TSL 1 (best)

Gene SOX9-AS1, Length 1,739 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-212ENST00000533232 PTPN12Q05209 780 aaKnown RBP9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HSP90AA2PQ14568 343 aaPredicted RBP9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 NEK1Q96PY6 1258 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 MAP7D2Q96T17 732 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HAUS7Q99871 368 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ZSCAN16Q9H4T2 348 aaPredicted RBP9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ATG3Q9NT62 314 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TPCN1Q9ULQ1 816 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CPDO75976 1380 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 COL18A1P39060 1754 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TNS3Q68CZ2 1445 aa9.26□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ARFGEF2Q9Y6D5 1785 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LARGE1O95461 756 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CAVIN2O95810 425 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CPA1P15085 419 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 RFX5P48382 616 aaPredicted RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DNM1Q05193 864 aaKnown RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 MTERF4Q7Z6M4 381 aaKnown RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 BCL11BQ9C0K0 894 aaPredicted RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HELLSQ9NRZ9 838 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DDX19AQ9NUU7 478 aaKnown RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CFAP45Q9UL16 551 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SH3TC1Q8TE82 1336 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 MEGF6O75095 1541 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 KDM4AO75164 1064 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 IL15P40933 162 aaPredicted RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ATL3Q6DD88 541 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 UBE3BQ7Z3V4 1068 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LRP10Q7Z4F1 713 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 KBTBD3Q8NAB2 608 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CWC25Q9NXE8 425 aaPredicted RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TLR7Q9NYK1 1049 aaKnown RBP9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 USP25Q9UHP3 1055 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 USP16Q9Y5T5 823 aa9.25□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ERVV-2B6SEH9 535 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 H7C1W4 665 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HMGN5P82970 282 aaKnown RBP9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FGD1P98174 961 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TFCP2Q12800 502 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 MAP3K11Q16584 847 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SPATA32Q96LK8 384 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LARP6Q9BRS8 491 aaKnown RBP9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DSCC1Q9BVC3 393 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 NUP62CLQ9H1M0 184 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PCDH11XQ9BZA7 1347 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PCDH11YQ9BZA8 1340 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TMEM94Q12767 1356 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SPEF2Q9C093 1822 aa9.24□□□□□ -0.93
SOX9-AS1-212ENST00000533232 H3BQV1 296 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CYP27B1O15528 508 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CIAO1O76071 339 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ADCY5O95622 1261 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TOB2Q14106 344 aaPredicted RBP9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 EPHA10Q5JZY3 1008 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SASS6Q6UVJ0 657 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CCDC191Q8NCU4 936 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 GTF3C6Q969F1 213 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FUCA2Q9BTY2 467 aa9.23□□□□□ -0.93
SOX9-AS1-212ENST00000533232 SPATA31A3Q5VYP0 1347 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HCLS1P14317 486 aaPredicted RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 HSP90B1P14625 803 aaKnown RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CASP7P55210 303 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LMBR1LQ6UX01 489 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 FAM200AQ8TCP9 573 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PIBF1Q8WXW3 757 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DNAJC2Q99543 621 aaKnown RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PDCL3Q9H2J4 239 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 AKAP2Q9Y2D5 859 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 R3HCC1Q9Y3T6 440 aaKnown RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CTAGE5O15320 804 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ST3GAL1Q11201 340 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 NAA16Q6N069 864 aaPredicted RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ZNF589Q86UQ0 364 aaPredicted RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 ZCRB1Q8TBF4 217 aaKnown RBP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PRIMPOLQ96LW4 560 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 TNMDQ9H2S6 317 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 PAG1Q9NWQ8 432 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 CTNNA3Q9UI47 895 aa9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.22□□□□□ -0.93
SOX9-AS1-212ENST00000533232 LCE2BO14633 110 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 PFKFB2O60825 505 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 ZFYP08048 801 aaPredicted RBP9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 FOXO4P98177 505 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 NKX1-1Q15270 411 aaPredicted RBP9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 GIMAP6Q6P9H5 292 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 Q6ZUG5 572 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 CDC37L1Q7L3B6 337 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 TTC6Q86TZ1 520 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 DBNDD2Q9BQY9 259 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
SOX9-AS1-212ENST00000533232 BCL2L12Q9HB09 334 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms