RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 YY1AP1Q9H869 796 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 ERVK-7P63135 1459 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 CTNNA3Q9UI47 895 aa7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.93□□□□□ -1.14
TGFBR3-210ENST00000533089 NDUFAB1O14561 156 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 CETN3O15182 167 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 OPA1O60313 960 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 GSDMDP57764 484 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 TMED1Q13445 227 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 SAAL1Q96ER3 474 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 KIF2CQ99661 725 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 KRT85P78386 507 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 MAP7Q14244 749 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 CCDC38Q502W7 563 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 USHBP1Q8N6Y0 703 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 LRRD1A4D1F6 860 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 GNAT3A8MTJ3 354 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 MYO1CO00159 1063 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 SKILP12757 684 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 BLOC1S2Q6QNY1 142 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 PPFIBP2Q8ND30 876 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 JAKMIP1Q96N16 626 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 DISP3Q9P2K9 1392 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 EXOC5O00471 708 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 RAD51AP2Q09MP3 1159 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 LARP1BQ659C4 914 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 ARMC2Q8NEN0 867 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 ZNF287Q9HBT7 754 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 UGGT1Q9NYU2 1555 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 LTKP29376 864 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 IMMTQ16891 758 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 TSNAXIP1Q2TAA8 658 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 SPECC1Q5M775 1068 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 TRMT1LQ7Z2T5 733 aaKnown RBP7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 TMC6Q7Z403 805 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 CCDC65Q8IXS2 484 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 TAOK3Q9H2K8 898 aa7.92□□□□□ -1.14
TGFBR3-210ENST00000533089 ADGBQ8N7X0 1667 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 ARL10Q8N8L6 244 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 C8orf37Q96NL8 207 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 MYD88Q99836 296 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 UBA5Q9GZZ9 404 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 PIK3R4Q99570 1358 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 GBP1P32455 592 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 CHRNA2Q15822 529 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 SNCBQ16143 134 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 TMCO4Q5TGY1 634 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 EFCAB13Q8IY85 973 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 POTEJP0CG39 1038 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 VPS41P49754 854 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 SESN3P58005 492 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 MMS22LQ6ZRQ5 1243 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 MIER3Q7Z3K6 550 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 PNMA8AQ86V59 439 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 TBC1D31Q96DN5 1066 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 UIMC1Q96RL1 719 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 NSRP1Q9H0G5 558 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 GCOM1H8Y6P7 765 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 VIMP08670 466 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 IFIT1P09914 478 aaKnown RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 MYZAPP0CAP1 466 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 PTGS1P23219 599 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 POLE2P56282 527 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 NFE2L2Q16236 605 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 SPTY2D1Q68D10 685 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 GLI2P10070 1586 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 HMGB1P1B2RPK0 211 aaPredicted RBP7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 SLC8A1P32418 973 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 CPLX4Q7Z7G2 160 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 SPATA32Q96LK8 384 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 UBAP1Q9NZ09 502 aa7.91□□□□□ -1.14
TGFBR3-210ENST00000533089 NOL3O60936 208 aaKnown RBP7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 PDCD7Q8N8D1 485 aaKnown RBP7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 WASF1Q92558 559 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 SATB2Q9UPW6 733 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 C6orf229H3BNL8 230 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 CUL5Q93034 780 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 PLXNC1O60486 1568 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 ABCC3O15438 1527 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 TTC36A6NLP5 189 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 TOP1P11387 765 aaKnown RBP7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 FLIIQ13045 1269 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 E2F5Q15329 346 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 CKAP2LQ8IYA6 745 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 KLHDC4Q8TBB5 520 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 TSC22D3Q99576 134 aa7.9□□□□□ -1.14
TGFBR3-210ENST00000533089 CACNA2D3Q8IZS8 1091 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 RMI1Q9H9A7 625 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 TRMT112Q9UI30 125 aaKnown RBP7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 ARHGEF10O15013 1369 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 SPATS2Q86XZ4 545 aaKnown RBP7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 ANKRD24Q8TF21 1146 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 SLAIN2Q9P270 581 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 AKAP2Q9Y2D5 859 aa7.9□□□□□ -1.15
TGFBR3-210ENST00000533089 SMIM23A6NLE4 172 aa7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 PPP1R12BO60237 982 aaPredicted RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 LUC7L3O95232 432 aaKnown RBP7.89□□□□□ -1.15
TGFBR3-210ENST00000533089 COG7P83436 770 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms