RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 DCTPP1Q9H773 170 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 TFIP11Q9UBB9 837 aaKnown RBP10.01□□□□□ -0.81
CTNND1-232ENST00000532649 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 GOPCQ9HD26 462 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 MCM9Q9NXL9 1143 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 NLRP1Q9C000 1473 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 CHL1O00533 1208 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 UFL1O94874 794 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 PLCG2P16885 1265 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 CNNM3Q8NE01 707 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 TCP11L1Q9NUJ3 509 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 TRIM35Q9UPQ4 493 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 PDE8AO60658 829 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 SPA17Q15506 151 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 PPP4R3BQ5MIZ7 849 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 LRSAM1Q6UWE0 723 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 FILIP1Q7Z7B0 1213 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 ZNF354CQ86Y25 554 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 VTI1AQ96AJ9 217 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 ZBTB40Q9NUA8 1239 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 GNAT2P19087 354 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 RTN1Q16799 776 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 SAMM50Q9Y512 469 aa10.01□□□□□ -0.81
CTNND1-232ENST00000532649 UBE4AQ14139 1066 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 SMC1AQ14683 1233 aaKnown RBP10□□□□□ -0.81
CTNND1-232ENST00000532649 FKBP15Q5T1M5 1219 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 FAM177A1Q8N128 213 aaPredicted RBP10□□□□□ -0.81
CTNND1-232ENST00000532649 FSIP1Q8NA03 581 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 CALML4Q96GE6 196 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 ZNF496Q96IT1 587 aaPredicted RBP10□□□□□ -0.81
CTNND1-232ENST00000532649 LMAN1P49257 510 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 CBX1P83916 185 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 RAB3IL1Q8TBN0 382 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 ANO10Q9NW15 660 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 USP19O94966 1318 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 CCDC183Q5T5S1 534 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 TBC1D32Q96NH3 1257 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 ZMYND15Q9H091 742 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 ERCC6L2Q5T890 1561 aa10□□□□□ -0.81
CTNND1-232ENST00000532649 SLU7O95391 586 aaKnown RBP9.99□□□□□ -0.81
CTNND1-232ENST00000532649 Q6ZUG5 572 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 CCDC24Q8N4L8 307 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 GDPD2Q9HCC8 539 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 EYA2O00167 538 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 HEATR3Q7Z4Q2 680 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 ERVV-2B6SEH9 535 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 CCDC102AQ96A19 550 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 BCCIPQ9P287 314 aaKnown RBP eCLIP9.99□□□□□ -0.811e-6■■■■□ 21.2
CTNND1-232ENST00000532649 DENND2AQ9ULE3 1009 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 FGFR1OPO95684 399 aaKnown RBP9.99□□□□□ -0.81
CTNND1-232ENST00000532649 A0A1B0GUL7 405 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 PRC1O43663 620 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 TTC16Q8NEE8 873 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 PANK2Q9BZ23 570 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 GJA3Q9Y6H8 435 aa9.99□□□□□ -0.81
CTNND1-232ENST00000532649 TIMM10P62072 90 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 KLHDC4Q8TBB5 520 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 ZNF594Q96JF6 807 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 TMX3Q96JJ7 454 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 ALG1Q9BT22 464 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 LMOD1P29536 600 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 UBA7P41226 1012 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 NOP2P46087 812 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 GNAQP50148 359 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 PUM3Q15397 648 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 SREK1Q8WXA9 508 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 TNPO1Q92973 898 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 IDEP14735 1019 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 PHKG2P15735 406 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 EIF4A1P60842 406 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 IFFO1Q0D2I5 559 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 CACNA2D4Q7Z3S7 1137 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 GGA1Q9UJY5 639 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 KIF1BO60333 1816 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 HIBADHP31937 336 aaKnown RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 CKAP2LQ8IYA6 745 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 MACROD2A1Z1Q3 448 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 ZBTB7BO15156 539 aaPredicted RBP9.98□□□□□ -0.81
CTNND1-232ENST00000532649 KIF20AO95235 890 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 BAG6P46379 1132 aa9.98□□□□□ -0.81
CTNND1-232ENST00000532649 H0YIN7 160 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 CHST3Q7LGC8 479 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 NBPF7P0C2Y1 421 aaPredicted RBP9.97□□□□□ -0.81
CTNND1-232ENST00000532649 AMPD3Q01432 767 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 TRAF1Q13077 416 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 CTAGE5O15320 804 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 TAOK3Q9H2K8 898 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 SHTN1A0MZ66 631 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 MBD4O95243 580 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 RBM25P49756 843 aaKnown RBP9.97□□□□□ -0.81
CTNND1-232ENST00000532649 NAPAP54920 295 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 TNNI3KQ59H18 835 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 FPGT-TNNI3KV9GXZ4 949 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 RFX1P22670 979 aa9.97□□□□□ -0.81
CTNND1-232ENST00000532649 CETN1Q12798 172 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms