RNA–Protein interactions for RNA: ENST00000532463.5

CTNND1-231, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-231ENST00000532463 SLC12A7Q9Y666 1083 aa9.15□□□□□ -0.95
CTNND1-231ENST00000532463 ZFXP17010 805 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-231ENST00000532463 ITIH3Q06033 890 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 PPFIA1Q13136 1202 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 AMOTQ4VCS5 1084 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 MRFAP1L1Q96HT8 127 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 FAM204AQ9H8W3 233 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 PPME1Q9Y570 386 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 MAN1A2O60476 641 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 DDX21Q9NR30 783 aaKnown RBP eCLIP9.14□□□□□ -0.954e-6■□□□□ 11.2
CTNND1-231ENST00000532463 WASHC2CQ9Y4E1 1318 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 SYT1P21579 422 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 SKOR1P84550 965 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 LGSNQ5TDP6 509 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 TSGA10Q9BZW7 698 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 DRC3Q9H069 523 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 MMRN2Q9H8L6 949 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 CTTNBP2NLQ9P2B4 639 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 TMEM110-MUSTN1A8MSY1 372 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 ARHGEF9O43307 516 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 IDH1O75874 414 aaKnown RBP9.14□□□□□ -0.95
CTNND1-231ENST00000532463 TUBB2AQ13885 445 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 KLHL40Q2TBA0 621 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 TUBB2BQ9BVA1 445 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 NUCKS1Q9H1E3 243 aaKnown RBP9.14□□□□□ -0.95
CTNND1-231ENST00000532463 NLRP2Q9NX02 1062 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 BAG5Q9UL15 447 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 LIMCH1Q9UPQ0 1083 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 DAAM1Q9Y4D1 1078 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC144AA2RUR9 1427 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 RNF40O75150 1001 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 PTGS1P23219 599 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 ESRRGP62508 458 aa9.14□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC117Q8IWD4 279 aaPredicted RBP9.14□□□□□ -0.95
CTNND1-231ENST00000532463 TNPO1Q92973 898 aaKnown RBP9.14□□□□□ -0.95
CTNND1-231ENST00000532463 ERMNQ8TAM6 284 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 RIPOR2Q9Y4F9 1068 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 SSFA2P28290 1259 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 GUCY1B3Q02153 619 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 RASA3Q14644 834 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 CRACR2BQ8N4Y2 399 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 ERO1AQ96HE7 468 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 MAK16Q9BXY0 300 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 RNF41Q9H4P4 317 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 VEZTQ9HBM0 779 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 NOB1Q9ULX3 412 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC18Q5T9S5 1454 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 RIOK3O14730 519 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 POLR3DP05423 398 aaPredicted RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 TMED1Q13445 227 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 ZNF569Q5MCW4 686 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 PRPF40BQ6NWY9 871 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 PPP1R21Q6ZMI0 780 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 SPATS2Q86XZ4 545 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 POLE3Q9NRF9 147 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 PSMA7O14818 248 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 BMP15O95972 392 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 PCYT1AP49585 367 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 EXOSC9Q06265 439 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 NUDCD3Q8IVD9 361 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 FAM200AQ8TCP9 573 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 GUCA1BQ9UMX6 200 aa9.13□□□□□ -0.95
CTNND1-231ENST00000532463 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.13□□□□□ -0.95
CTNND1-231ENST00000532463 MCM7P33993 719 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 FNBP4Q8N3X1 1017 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 SCAPERQ9BY12 1400 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 POTEB3A0JP26 581 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 E7EVH7 732 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 HCLS1P14317 486 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 U2AF2P26368 475 aaKnown RBP eCLIP9.12□□□□□ -0.951e-10■■□□□ 14
CTNND1-231ENST00000532463 HS1BP3Q53T59 392 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 POTEBQ6S5H4 581 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 MCM10Q7L590 875 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 NAPBQ9H115 298 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 EFCC1Q9HA90 598 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 SLC4A2P04920 1241 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 PLEKHO1Q53GL0 409 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 HDGFL1Q5TGJ6 251 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 RPAP2Q8IXW5 612 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 IWS1Q96ST2 819 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 SRGAP3O43295 1099 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 TROVE2P10155 538 aaKnown RBP eCLIP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 EVCP57679 992 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 PNISRQ8TF01 805 aaKnown RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC124Q96CT7 223 aaKnown RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 ARHGAP42A6NI28 874 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 C11orf95C9JLR9 678 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 IRX5P78411 483 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 CCDC184Q52MB2 194 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 CATIPQ7Z7H3 387 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 OSCARQ8IYS5 282 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 NLRP7Q8WX94 980 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 PLCB1Q9NQ66 1216 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 ANLNQ9NQW6 1124 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 SCHIP1Q9P0W5 487 aaPredicted RBP9.12□□□□□ -0.95
CTNND1-231ENST00000532463 STK38LQ9Y2H1 464 aa9.12□□□□□ -0.95
CTNND1-231ENST00000532463 GLRX3O76003 335 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms