RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 KLF18A0A0U1RQI7 1052 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 NBPF7P0C2Y1 421 aaPredicted RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 RTN1Q16799 776 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 VSIG10Q8N0Z9 540 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 TBC1D22AQ8WUA7 517 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 ANO10Q9NW15 660 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 TTC41PQ6P2S7 1318 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 AXDND1Q5T1B0 1012 aaPredicted RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 SYCE3A1L190 88 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 CRKLP46109 303 aaKnown RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 A2ML1A8K2U0 1454 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 PTPRTO14522 1441 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 GOLGA6L10A6NI86 522 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 TAF5LO75529 589 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 CALM1P0DP23 149 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 CALM2P0DP24 149 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 CALM3P0DP25 149 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 IQCEQ6IPM2 695 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 MROH5Q6ZUA9 1318 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 SPDYE3A6NKU9 549 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 NAPAP54920 295 aa13□□□□□ -0.33
PTPRK-221ENST00000532331 EIF4A1P60842 406 aaKnown RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 RRP36Q96EU6 259 aaKnown RBP13□□□□□ -0.33
PTPRK-221ENST00000532331 A0A1B0GUL7 405 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 AMPD3Q01432 767 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 TNFAIP1Q13829 316 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 CHL1O00533 1208 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 PDE1AP54750 535 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 CCDC183Q5T5S1 534 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 DCPSQ96C86 337 aaKnown RBP12.99□□□□□ -0.33
PTPRK-221ENST00000532331 BRPF3Q9ULD4 1205 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 ERLIN1O75477 346 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 TBC1D9Q6ZT07 1266 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 KIAA1328Q86T90 577 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 LPIN2Q92539 896 aa12.99□□□□□ -0.33
PTPRK-221ENST00000532331 G2E3Q7L622 706 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 CWC15Q9P013 229 aaKnown RBP12.98□□□□□ -0.33
PTPRK-221ENST00000532331 RTL9Q8NET4 1388 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 CSADQ9Y600 493 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 NEFHP12036 1026 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 HDAC1Q13547 482 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-221ENST00000532331 ZNF594Q96JF6 807 aaPredicted RBP12.98□□□□□ -0.33
PTPRK-221ENST00000532331 NPC1L1Q9UHC9 1359 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 MBD4O95243 580 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 FGFR1OPO95684 399 aaKnown RBP12.98□□□□□ -0.33
PTPRK-221ENST00000532331 BICD1Q96G01 975 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 MAP3K4Q9Y6R4 1608 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 FAM135BQ49AJ0 1406 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 SPATA31A3Q5VYP0 1347 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 CTAGE5O15320 804 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 UBA7P41226 1012 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 FKBP15Q5T1M5 1219 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
PTPRK-221ENST00000532331 ABCC3O15438 1527 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 ARHGAP29Q52LW3 1261 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-221ENST00000532331 SYCP3Q8IZU3 236 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 TAF4BQ92750 862 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 C6orf50Q9HD87 102 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 RBM27Q9P2N5 1060 aaKnown RBP12.97□□□□□ -0.33
PTPRK-221ENST00000532331 ASAP1Q9ULH1 1129 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 ANKARQ7Z5J8 1434 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 GCKRQ14397 625 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 CEP85Q6P2H3 762 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 SULF1Q8IWU6 871 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 XAGE2Q96GT9 111 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 LRRC27Q9C0I9 530 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 GCC2Q8IWJ2 1684 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 TIMM10P62072 90 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 GTF2IP78347 998 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 NUCB1Q02818 461 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 NCBP1Q09161 790 aaKnown RBP12.97□□□□□ -0.33
PTPRK-221ENST00000532331 NMIQ13287 307 aaPredicted RBP12.97□□□□□ -0.33
PTPRK-221ENST00000532331 BRF1Q92994 677 aa12.97□□□□□ -0.33
PTPRK-221ENST00000532331 TBCAO75347 108 aaKnown RBP12.96□□□□□ -0.33
PTPRK-221ENST00000532331 IDEP14735 1019 aa12.96□□□□□ -0.33
PTPRK-221ENST00000532331 LARP6Q9BRS8 491 aaKnown RBP12.96□□□□□ -0.33
PTPRK-221ENST00000532331 KLHL10Q6JEL2 608 aa12.96□□□□□ -0.33
PTPRK-221ENST00000532331 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
PTPRK-221ENST00000532331 RBM8AQ9Y5S9 174 aaKnown RBP12.96□□□□□ -0.33
PTPRK-221ENST00000532331 KIF22Q14807 665 aa12.96□□□□□ -0.33
PTPRK-221ENST00000532331 USP19O94966 1318 aa12.96□□□□□ -0.33
PTPRK-221ENST00000532331 CTSWP56202 376 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 JCADQ9P266 1359 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 ADGRL3Q9HAR2 1447 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 RIMBP3CA6NJZ7 1639 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 RIMBP3BA6NNM3 1639 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 RIMBP3Q9UFD9 1639 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 H0YHG0 523 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 SERPINB2P05120 415 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 SSR1P43307 286 aaKnown RBP12.96□□□□□ -0.34
PTPRK-221ENST00000532331 CETN1Q12798 172 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 TCP10Q12799 353 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 SEPT7Q16181 437 aaKnown RBP12.96□□□□□ -0.34
PTPRK-221ENST00000532331 JAKMIP3Q5VZ66 844 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 IL27Q8NEV9 243 aa12.96□□□□□ -0.34
PTPRK-221ENST00000532331 PYM1Q9BRP8 204 aaKnown RBP12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms