RNA–Protein interactions for RNA: ENST00000532145.1

LRRK1-209, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 2

Gene LRRK1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-209ENST00000532145 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 NBPF14Q5TI25 921 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 NBPF10Q6P3W6 841 aaKnown RBP16.58■□□□□ 0.24
LRRK1-209ENST00000532145 NBPF15Q8N660 670 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 ANKRD7Q92527 254 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 MRFAP1L1Q96HT8 127 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 PKNOX2Q96KN3 472 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 ZNF396Q96N95 335 aaPredicted RBP16.58■□□□□ 0.24
LRRK1-209ENST00000532145 GOLPH3LQ9H4A5 285 aa16.58■□□□□ 0.24
LRRK1-209ENST00000532145 PDIA3P30101 505 aaKnown RBP16.57■□□□□ 0.24
LRRK1-209ENST00000532145 CACTINQ8WUQ7 758 aaKnown RBP16.57■□□□□ 0.24
LRRK1-209ENST00000532145 FTOQ9C0B1 505 aaKnown RBP eCLIP16.57■□□□□ 0.24
LRRK1-209ENST00000532145 MYH15Q9Y2K3 1946 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 GOLGA6L19H0YKK7 550 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 EVCP57679 992 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 CCDC144BQ3MJ40 725 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 C11orf57Q6ZUT1 292 aaPredicted RBP16.57■□□□□ 0.24
LRRK1-209ENST00000532145 CCDC144CPQ8IYA2 1237 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 ARID3AQ99856 593 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
LRRK1-209ENST00000532145 MAST3O60307 1309 aa16.57■□□□□ 0.24
LRRK1-209ENST00000532145 FAM160A1Q05DH4 1040 aa16.56■□□□□ 0.24
LRRK1-209ENST00000532145 CCDC73Q6ZRK6 1079 aa16.56■□□□□ 0.24
LRRK1-209ENST00000532145 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
LRRK1-209ENST00000532145 EYA2O00167 538 aa16.56■□□□□ 0.24
LRRK1-209ENST00000532145 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
LRRK1-209ENST00000532145 CCT2P78371 535 aaKnown RBP16.56■□□□□ 0.24
LRRK1-209ENST00000532145 ILDR1Q86SU0 546 aaPredicted RBP16.56■□□□□ 0.24
LRRK1-209ENST00000532145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
LRRK1-209ENST00000532145 CCDC9Q9Y3X0 531 aaKnown RBP16.56■□□□□ 0.24
LRRK1-209ENST00000532145 A0A0G2JLW4 131 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 NCOA5Q9HCD5 579 aaKnown RBP16.55■□□□□ 0.24
LRRK1-209ENST00000532145 SPEF2Q9C093 1822 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 KINO60870 393 aaKnown RBP16.55■□□□□ 0.24
LRRK1-209ENST00000532145 CIAO1O76071 339 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 ADAMTSL3P82987 1691 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 NEMFO60524 1076 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 IFIT1P09914 478 aaKnown RBP16.55■□□□□ 0.24
LRRK1-209ENST00000532145 LRRC8AQ8IWT6 810 aa16.55■□□□□ 0.24
LRRK1-209ENST00000532145 C16orf45Q96MC5 204 aaPredicted RBP16.55■□□□□ 0.24
LRRK1-209ENST00000532145 PARP4Q9UKK3 1724 aaKnown RBP16.54■□□□□ 0.24
LRRK1-209ENST00000532145 SMTNL1A8MU46 457 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 CCDC191Q8NCU4 936 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 ANO10Q9NW15 660 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 A0A1B0GUL7 405 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 FDPSP14324 419 aaKnown RBP16.54■□□□□ 0.24
LRRK1-209ENST00000532145 RBM6P78332 1123 aaKnown RBP16.54■□□□□ 0.24
LRRK1-209ENST00000532145 SYCP1Q15431 976 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 DHX40Q8IX18 779 aaKnown RBP16.54■□□□□ 0.24
LRRK1-209ENST00000532145 PDCL2Q8N4E4 241 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 PAXBP1Q9Y5B6 917 aa16.54■□□□□ 0.24
LRRK1-209ENST00000532145 TNNT1P13805 278 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 PPP4R3BQ5MIZ7 849 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 TJP1Q07157 1748 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 ME1P48163 572 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 FOSBP53539 338 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
LRRK1-209ENST00000532145 M0R2C6 588 aa16.52■□□□□ 0.24
LRRK1-209ENST00000532145 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.24
LRRK1-209ENST00000532145 FSIP1Q8NA03 581 aa16.52■□□□□ 0.24
LRRK1-209ENST00000532145 NUP188Q5SRE5 1749 aa16.52■□□□□ 0.24
LRRK1-209ENST00000532145 A0A1W2PQ27 194 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 A0A1W2PQ64 194 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 A0A1W2PQD8 194 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 BECN2A8MW95 431 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 CHRNA2Q15822 529 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 ADALQ6DHV7 355 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 CHST3Q7LGC8 479 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 OSBP2Q969R2 916 aa16.52■□□□□ 0.23
LRRK1-209ENST00000532145 TTLL5Q6EMB2 1281 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 CABLES1Q8TDN4 633 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 ZNF594Q96JF6 807 aaPredicted RBP16.51■□□□□ 0.23
LRRK1-209ENST00000532145 PCDHA7Q9UN72 937 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 GUCY1B3Q02153 619 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 CEP57L1Q8IYX8 460 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 MRPS27Q92552 414 aaKnown RBP16.51■□□□□ 0.23
LRRK1-209ENST00000532145 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 PRDM4Q9UKN5 801 aa16.51■□□□□ 0.23
LRRK1-209ENST00000532145 FOXP2O15409 715 aa16.5■□□□□ 0.23
LRRK1-209ENST00000532145 TPD52L1Q16890 204 aaPredicted RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 LRRFIP1Q32MZ4 808 aaKnown RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 DDX17Q92841 729 aaKnown RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 CPDO75976 1380 aa16.5■□□□□ 0.23
LRRK1-209ENST00000532145 NCBP1Q09161 790 aaKnown RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 LINC00301Q8NCQ3 95 aa16.5■□□□□ 0.23
LRRK1-209ENST00000532145 NAT10Q9H0A0 1025 aaKnown RBP16.5■□□□□ 0.23
LRRK1-209ENST00000532145 ZFYP08048 801 aaPredicted RBP16.49■□□□□ 0.23
LRRK1-209ENST00000532145 ATP2B3Q16720 1220 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 PUS3Q9BZE2 481 aaKnown RBP16.49■□□□□ 0.23
LRRK1-209ENST00000532145 FBXO3Q9UK99 471 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 PPFIA3O75145 1194 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 ATF3P18847 181 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 POLR3EQ9NVU0 708 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
LRRK1-209ENST00000532145 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms