RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MPP4Q96JB8 637 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 C9orf78Q9NZ63 289 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 USP25Q9UHP3 1055 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 TSKSQ9UJT2 592 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 MYO15BQ96JP2 1530 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 A0A087X0B3 334 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 RASSF10A6NK89 507 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 EIF1AYO14602 144 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 NBPF7P0C2Y1 421 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 PICALMQ13492 652 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 TRMT2BQ96GJ1 504 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 HERPUD2Q9BSE4 406 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 C2orf49Q9BVC5 232 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 OSBPL7Q9BZF2 842 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 FEZ2Q9UHY8 353 aaPredicted RBP6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 POLIQ9UNA4 740 aa6.42□□□□□ -1.38
ECHDC1-222ENST00000531967 PTK2Q05397 1052 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 ATCAYQ86WG3 371 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 NIM1KQ8IY84 436 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 SMAD5Q99717 465 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 CHMP4BQ9H444 224 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 MAPK8IP1Q9UQF2 711 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 SH3BP1Q9Y3L3 701 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 FIBPO43427 364 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 F12P00748 615 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 FUT2Q10981 343 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 MTERF2Q49AM1 385 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 TNNI3KQ59H18 835 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 ANKRD23Q86SG2 305 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 ZNF354CQ86Y25 554 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 VPS37AQ8NEZ2 397 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 EAF1Q96JC9 268 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 PNMA3Q9UL41 463 aa6.41□□□□□ -1.38
ECHDC1-222ENST00000531967 TRIM6-TRIM34B2RNG4 842 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 NBPF26B4DH59 902 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 IRS4O14654 1257 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 PDE8AO60658 829 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 TIE1P35590 1138 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 PUM3Q15397 648 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 MMS22LQ6ZRQ5 1243 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 RNF180Q86T96 592 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 NINJ1Q92982 152 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 TATDN2Q93075 761 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 HOOK2Q96ED9 719 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 SCLT1Q96NL6 688 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 MAP10Q9P2G4 905 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 ISY1Q9ULR0 285 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 TRIM35Q9UPQ4 493 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 IPPQ9Y573 584 aa6.4□□□□□ -1.38
ECHDC1-222ENST00000531967 A0A1W2PRQ8 180 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 E2F8A0AVK6 867 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 KLRG2A4D1S0 409 aaPredicted RBP6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 ZBTB39O15060 712 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 TRIM37O94972 964 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 RPN1P04843 607 aaKnown RBP6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 PRKAR2AP13861 404 aaKnown RBP6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 COL9A2Q14055 689 aaPredicted RBP6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 USPL1Q5W0Q7 1092 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 WWC2Q6AWC2 1192 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 ANKRD13DQ6ZTN6 518 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 SCG3Q8WXD2 468 aaKnown RBP6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 MS4A3Q96HJ5 214 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 ADAM33Q9BZ11 813 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 AASDHPPTQ9NRN7 309 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 OBP2AQ9NY56 170 aa6.4□□□□□ -1.39
ECHDC1-222ENST00000531967 SERPINB3P29508 390 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 ARMC3Q5W041 872 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 PJA1Q8NG27 643 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 SERINC2Q96SA4 455 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 STRBPQ96SI9 672 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 KDM2BQ8NHM5 1336 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 DIAPH1O60610 1272 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 NBNO60934 754 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 HSP90AB1P08238 724 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 BCAMP50895 628 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 MTMR1Q13613 665 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 AKAP4Q5JQC9 854 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 COX20Q5RI15 118 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 CLASRPQ8N2M8 674 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 AFAP1L2Q8N4X5 818 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 KIAA1958Q8N8K9 716 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 TIFAQ96CG3 184 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 SHDQ96IW2 340 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 SARGQ9BW04 601 aa6.39□□□□□ -1.39
ECHDC1-222ENST00000531967 VSTM5A8MXK1 200 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 hCG_1984214I3L0E3 225 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 ORC4O43929 436 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 PERM1Q5SV97 790 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 PPP4R3AQ6IN85 833 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 IFNL2Q8IZJ0 200 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 ATXN2LQ8WWM7 1075 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 FAM8A1Q9UBU6 413 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 ZNF180Q9UJW8 692 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 GJA3Q9Y6H8 435 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 GIPC1O14908 333 aa6.38□□□□□ -1.39
ECHDC1-222ENST00000531967 USP17L7P0C7H9 530 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms