RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 TRIOBPQ9H2D6 2365 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 FKTNO75072 461 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 FKBP1BP68106 108 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 HABP4Q5JVS0 413 aaKnown RBP11.67□□□□□ -0.54
USF1-210ENST00000531842 DACT2Q5SW24 774 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 MBIPQ9NS73 344 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 A0A1B0GUL6 1792 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 SSC5DA1L4H1 1573 aa11.67□□□□□ -0.54
USF1-210ENST00000531842 XDHP47989 1333 aa11.66□□□□□ -0.54
USF1-210ENST00000531842 SNAP23O00161 211 aa11.66□□□□□ -0.54
USF1-210ENST00000531842 TRIM28Q13263 835 aaKnown RBP11.66□□□□□ -0.54
USF1-210ENST00000531842 PKN2Q16513 984 aaKnown RBP11.66□□□□□ -0.54
USF1-210ENST00000531842 PNNQ9H307 717 aaKnown RBP11.66□□□□□ -0.54
USF1-210ENST00000531842 HYPKQ9NX55 129 aa11.66□□□□□ -0.54
USF1-210ENST00000531842 ANGEL1Q9UNK9 670 aaKnown RBP11.66□□□□□ -0.54
USF1-210ENST00000531842 TRIM17Q9Y577 477 aa11.66□□□□□ -0.54
USF1-210ENST00000531842 LAMB1P07942 1786 aa11.66□□□□□ -0.54
USF1-210ENST00000531842 IGF2BP3O00425 579 aaKnown RBP eCLIP11.65□□□□□ -0.54
USF1-210ENST00000531842 PDE8AO60658 829 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 PCCAP05165 728 aaPredicted RBP11.65□□□□□ -0.54
USF1-210ENST00000531842 EN2P19622 333 aaPredicted RBP11.65□□□□□ -0.54
USF1-210ENST00000531842 LMOD3Q0VAK6 560 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 SPRYD7Q5W111 196 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 GREM2Q9H772 168 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 MINPP1Q9UNW1 487 aa11.65□□□□□ -0.54
USF1-210ENST00000531842 ATP2B4P23634 1241 aa11.64□□□□□ -0.55
USF1-210ENST00000531842 GOLGA2Q08379 1002 aa11.64□□□□□ -0.55
USF1-210ENST00000531842 OTOP1Q7RTM1 612 aa11.64□□□□□ -0.55
USF1-210ENST00000531842 REM2Q8IYK8 340 aaPredicted RBP11.64□□□□□ -0.55
USF1-210ENST00000531842 CD99L2Q8TCZ2 262 aa11.64□□□□□ -0.55
USF1-210ENST00000531842 MYCP01106 439 aaPredicted RBP11.63□□□□□ -0.55
USF1-210ENST00000531842 IGKV5-2P06315 115 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 GJA5P36382 358 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 CCT4P50991 539 aaKnown RBP11.63□□□□□ -0.55
USF1-210ENST00000531842 CTSWP56202 376 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 LDLRAD1Q5T700 205 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 PODNQ7Z5L7 613 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 C8orf58Q8NAV2 365 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 CWC25Q9NXE8 425 aaPredicted RBP11.63□□□□□ -0.55
USF1-210ENST00000531842 JAG2Q9Y219 1238 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 MED23Q9ULK4 1368 aa11.63□□□□□ -0.55
USF1-210ENST00000531842 CLRN2A0PK11 232 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 GTF2IP78347 998 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 SREBF2Q12772 1141 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 CWF19L2Q2TBE0 894 aaKnown RBP11.62□□□□□ -0.55
USF1-210ENST00000531842 IFNL1Q8IU54 200 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 CERS5Q8N5B7 392 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 CCDC191Q8NCU4 936 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 ZBED3Q96IU2 234 aaPredicted RBP11.62□□□□□ -0.55
USF1-210ENST00000531842 ADAMTS8Q9UP79 889 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 MAP3K2Q9Y2U5 619 aa11.62□□□□□ -0.55
USF1-210ENST00000531842 F8W031 263 aaPredicted RBP11.61□□□□□ -0.55
USF1-210ENST00000531842 ECM2O94769 699 aaPredicted RBP11.61□□□□□ -0.55
USF1-210ENST00000531842 HOXB7P09629 217 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 NF2P35240 595 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
USF1-210ENST00000531842 ARMC9Q7Z3E5 817 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 CDAN1Q8IWY9 1227 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 TSPYL6Q8N831 410 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 RUNDC1Q96C34 613 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 WNK4Q96J92 1243 aa11.61□□□□□ -0.55
USF1-210ENST00000531842 METTL22Q9BUU2 404 aaPredicted RBP11.61□□□□□ -0.55
USF1-210ENST00000531842 ZNF853P0CG23 659 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 CRHR2Q13324 411 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 NOM1Q5C9Z4 860 aaKnown RBP11.6□□□□□ -0.55
USF1-210ENST00000531842 NBPF12Q5TAG4 269 aaPredicted RBP11.6□□□□□ -0.55
USF1-210ENST00000531842 STRIP1Q5VSL9 837 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 TTLL5Q6EMB2 1281 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 G2E3Q7L622 706 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 HELBQ8NG08 1087 aaPredicted RBP11.6□□□□□ -0.55
USF1-210ENST00000531842 CNKSR2Q8WXI2 1034 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 SLC10A4Q96EP9 437 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 PTPN18Q99952 460 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 CFHR5Q9BXR6 569 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 BSDC1Q9NW68 430 aaPredicted RBP11.6□□□□□ -0.55
USF1-210ENST00000531842 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
USF1-210ENST00000531842 RANBP2P49792 3224 aaKnown RBP11.6□□□□□ -0.55
USF1-210ENST00000531842 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
USF1-210ENST00000531842 COA1Q9GZY4 146 aa11.59□□□□□ -0.55
USF1-210ENST00000531842 DEFB129Q9H1M3 183 aa11.59□□□□□ -0.55
USF1-210ENST00000531842 COLQQ9Y215 455 aaPredicted RBP11.59□□□□□ -0.55
USF1-210ENST00000531842 PI4KAP2A4QPH2 592 aa11.58□□□□□ -0.56
USF1-210ENST00000531842 TAF5LO75529 589 aa11.58□□□□□ -0.56
USF1-210ENST00000531842 UBE3BQ7Z3V4 1068 aa11.58□□□□□ -0.56
USF1-210ENST00000531842 APOBEC3FQ8IUX4 373 aaKnown RBP11.58□□□□□ -0.56
USF1-210ENST00000531842 PI4KAP1Q8N8J0 262 aa11.58□□□□□ -0.56
USF1-210ENST00000531842 ZNF804BA4D1E1 1349 aa11.58□□□□□ -0.56
USF1-210ENST00000531842 MANSC4A6NHS7 340 aaPredicted RBP11.57□□□□□ -0.56
USF1-210ENST00000531842 APAF1O14727 1248 aa11.57□□□□□ -0.56
USF1-210ENST00000531842 USP2O75604 605 aaPredicted RBP11.57□□□□□ -0.56
USF1-210ENST00000531842 WDR43Q15061 677 aaKnown RBP eCLIP11.57□□□□□ -0.56
USF1-210ENST00000531842 GCC1Q96CN9 775 aa11.57□□□□□ -0.56
USF1-210ENST00000531842 PRMT6Q96LA8 375 aaPredicted RBP11.57□□□□□ -0.56
USF1-210ENST00000531842 ELP3Q9H9T3 547 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms