RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 MED26O95402 600 aa8.07□□□□□ -1.12
USP47-211ENST00000531513 KIAA1211Q6ZU35 1233 aa8.07□□□□□ -1.12
USP47-211ENST00000531513 ABTB2Q8N961 1025 aa8.07□□□□□ -1.12
USP47-211ENST00000531513 FOXD4L4Q8WXT5 416 aaPredicted RBP8.07□□□□□ -1.12
USP47-211ENST00000531513 CLP1Q92989 425 aaKnown RBP8.07□□□□□ -1.12
USP47-211ENST00000531513 UTP4Q969X6 686 aaKnown RBP8.07□□□□□ -1.12
USP47-211ENST00000531513 PBX4Q9BYU1 374 aa8.07□□□□□ -1.12
USP47-211ENST00000531513 KIAA1324LA8MWY0 1029 aaPredicted RBP8.06□□□□□ -1.12
USP47-211ENST00000531513 ADAM11O75078 769 aa8.06□□□□□ -1.12
USP47-211ENST00000531513 CEP120Q8N960 986 aa8.06□□□□□ -1.12
USP47-211ENST00000531513 UBASH3BQ8TF42 649 aa8.06□□□□□ -1.12
USP47-211ENST00000531513 SH2B1Q9NRF2 756 aaPredicted RBP8.06□□□□□ -1.12
USP47-211ENST00000531513 TMEM63CQ9P1W3 806 aa8.06□□□□□ -1.12
USP47-211ENST00000531513 SLAIN2Q9P270 581 aa8.06□□□□□ -1.12
USP47-211ENST00000531513 DDX3YO15523 660 aaKnown RBP8.05□□□□□ -1.12
USP47-211ENST00000531513 PTPRAP18433 802 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 DUOXA2Q1HG44 320 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 UVSSAQ2YD98 709 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 FAM117BQ6P1L5 589 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 NCAPG2Q86XI2 1143 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 KLHL23Q8NBE8 558 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 FAM46AQ96IP4 442 aaKnown RBP8.05□□□□□ -1.12
USP47-211ENST00000531513 C7orf69Q9H7B7 122 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 C1orf115Q9H7X2 142 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 PODXL2Q9NZ53 605 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 KANSL3Q9P2N6 904 aa8.05□□□□□ -1.12
USP47-211ENST00000531513 COBLO75128 1261 aa8.04□□□□□ -1.12
USP47-211ENST00000531513 ATCAYQ86WG3 371 aa8.04□□□□□ -1.12
USP47-211ENST00000531513 ZDHHC13Q8IUH4 622 aa8.04□□□□□ -1.12
USP47-211ENST00000531513 NUDT16Q96DE0 195 aaKnown RBP8.04□□□□□ -1.12
USP47-211ENST00000531513 POP1Q99575 1024 aaKnown RBP8.04□□□□□ -1.12
USP47-211ENST00000531513 ELP3Q9H9T3 547 aa8.04□□□□□ -1.12
USP47-211ENST00000531513 NFIAQ12857 509 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 PDE12Q6L8Q7 609 aaKnown RBP8.03□□□□□ -1.12
USP47-211ENST00000531513 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 TRIM42Q8IWZ5 723 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 KLHDC7BQ96G42 594 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 MYRFLQ96LU7 910 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 ARID3AQ99856 593 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 ADAM19Q9H013 955 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 SEPT3Q9UH03 358 aa8.03□□□□□ -1.12
USP47-211ENST00000531513 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.03□□□□□ -1.12
USP47-211ENST00000531513 COL17A1Q9UMD9 1497 aaPredicted RBP8.02□□□□□ -1.13
USP47-211ENST00000531513 FAM177BA6PVY3 158 aa8.02□□□□□ -1.13
USP47-211ENST00000531513 H3BRJ5 948 aa8.02□□□□□ -1.13
USP47-211ENST00000531513 ACPPP15309 386 aa8.02□□□□□ -1.13
USP47-211ENST00000531513 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
USP47-211ENST00000531513 CNTN3Q9P232 1028 aa8.02□□□□□ -1.13
USP47-211ENST00000531513 HMX2A2RU54 273 aa8.01□□□□□ -1.13
USP47-211ENST00000531513 ATP2B4P23634 1241 aa8.01□□□□□ -1.13
USP47-211ENST00000531513 PIP4K2BP78356 416 aa8□□□□□ -1.13
USP47-211ENST00000531513 RNF43Q68DV7 783 aa8□□□□□ -1.13
USP47-211ENST00000531513 DBNDD2Q9BQY9 259 aa8□□□□□ -1.13
USP47-211ENST00000531513 SALL4Q9UJQ4 1053 aa8□□□□□ -1.13
USP47-211ENST00000531513 OAS3Q9Y6K5 1087 aaKnown RBP8□□□□□ -1.13
USP47-211ENST00000531513 ARID3CA6NKF2 412 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 SPINK2P20155 84 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 PREPP48147 710 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 IRAK1P51617 712 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 GP2P55259 537 aaKnown RBP7.99□□□□□ -1.13
USP47-211ENST00000531513 CABP4P57796 275 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 LCE1DQ5T752 114 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.99□□□□□ -1.13
USP47-211ENST00000531513 FAM20CQ8IXL6 584 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 C1orf127Q8N9H9 656 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 EDEM1Q92611 657 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 WNT8BQ93098 351 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 PBXIP1Q96AQ6 731 aa7.99□□□□□ -1.13
USP47-211ENST00000531513 PRR19A6NJB7 356 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 NFKBIEO00221 500 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 ADAMTS4O75173 837 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 CES1P23141 567 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 NLRP12P59046 1061 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 TRIM26Q12899 539 aaPredicted RBP7.98□□□□□ -1.13
USP47-211ENST00000531513 HHIPQ96QV1 700 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 DZANK1Q9NVP4 752 aa7.98□□□□□ -1.13
USP47-211ENST00000531513 A6NHS1 94 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 SART1O43290 800 aaKnown RBP7.97□□□□□ -1.13
USP47-211ENST00000531513 TRPA1O75762 1119 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 BMP3P12645 472 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 GRIK1P39086 918 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 ANKRD34AQ69YU3 496 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 INTS5Q6P9B9 1019 aaKnown RBP7.97□□□□□ -1.13
USP47-211ENST00000531513 XKR5Q6UX68 686 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 HELQQ8TDG4 1101 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 SLC7A3Q8WY07 619 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 FAM83CQ9BQN1 747 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 RNF208Q9H0X6 261 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 GGNBP2Q9H3C7 697 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 OSGEPQ9NPF4 335 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 SERPINA10Q9UK55 444 aa7.97□□□□□ -1.13
USP47-211ENST00000531513 PDE2AO00408 941 aaPredicted RBP7.96□□□□□ -1.14
USP47-211ENST00000531513 PAX4O43316 350 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 PDGFAP04085 211 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 RPLP1P05386 114 aaKnown RBP7.96□□□□□ -1.14
USP47-211ENST00000531513 DNM1Q05193 864 aaKnown RBP7.96□□□□□ -1.14
USP47-211ENST00000531513 BEND4Q6ZU67 534 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 CLEC10AQ8IUN9 316 aa7.96□□□□□ -1.14
USP47-211ENST00000531513 SHKBP1Q8TBC3 707 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms