RNA–Protein interactions for RNA: ENST00000531495.1

SSH3-207, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2

Gene SSH3, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-207ENST00000531495 DDX10Q13206 875 aaKnown RBP17.07■□□□□ 0.32
SSH3-207ENST00000531495 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
SSH3-207ENST00000531495 STRIP1Q5VSL9 837 aa17.07■□□□□ 0.32
SSH3-207ENST00000531495 PRAMEF18Q5VWM3 479 aa17.07■□□□□ 0.32
SSH3-207ENST00000531495 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
SSH3-207ENST00000531495 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
SSH3-207ENST00000531495 DDX60Q8IY21 1712 aaKnown RBP17.07■□□□□ 0.32
SSH3-207ENST00000531495 GPR25O00155 361 aa17.06■□□□□ 0.32
SSH3-207ENST00000531495 CCT4P50991 539 aaKnown RBP17.06■□□□□ 0.32
SSH3-207ENST00000531495 NOM1Q5C9Z4 860 aaKnown RBP17.06■□□□□ 0.32
SSH3-207ENST00000531495 MINPP1Q9UNW1 487 aa17.06■□□□□ 0.32
SSH3-207ENST00000531495 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
SSH3-207ENST00000531495 LEMD3Q9Y2U8 911 aa17.06■□□□□ 0.32
SSH3-207ENST00000531495 AKAP11Q9UKA4 1901 aa17.06■□□□□ 0.32
SSH3-207ENST00000531495 MED23Q9ULK4 1368 aa17.05■□□□□ 0.32
SSH3-207ENST00000531495 WNT10BO00744 389 aa17.05■□□□□ 0.32
SSH3-207ENST00000531495 IGHMBP2P38935 993 aaKnown RBP17.05■□□□□ 0.32
SSH3-207ENST00000531495 KSR2Q6VAB6 950 aa17.05■□□□□ 0.32
SSH3-207ENST00000531495 TTLL11Q8NHH1 800 aa17.05■□□□□ 0.32
SSH3-207ENST00000531495 SCAF8Q9UPN6 1271 aaKnown RBP17.05■□□□□ 0.32
SSH3-207ENST00000531495 APAF1O14727 1248 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 ALDH1A1P00352 501 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 MKRN3Q13064 507 aaKnown RBP17.04■□□□□ 0.32
SSH3-207ENST00000531495 DACT2Q5SW24 774 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 FBXO46Q6PJ61 603 aaPredicted RBP17.04■□□□□ 0.32
SSH3-207ENST00000531495 APOBEC3FQ8IUX4 373 aaKnown RBP17.04■□□□□ 0.32
SSH3-207ENST00000531495 STK31Q9BXU1 1019 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 ANKRD2Q9GZV1 360 aa17.04■□□□□ 0.32
SSH3-207ENST00000531495 PI4KAP2A4QPH2 592 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 FKTNO75072 461 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 INHBEP58166 350 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 PI4KAP1Q8N8J0 262 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 C8orf58Q8NAV2 365 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 MPHOSPH8Q99549 860 aa17.03■□□□□ 0.32
SSH3-207ENST00000531495 KCNJ4P48050 445 aa17.02■□□□□ 0.32
SSH3-207ENST00000531495 PTPN12Q05209 780 aaKnown RBP17.02■□□□□ 0.32
SSH3-207ENST00000531495 PRKG1Q13976 671 aa17.02■□□□□ 0.32
SSH3-207ENST00000531495 SLC10A4Q96EP9 437 aa17.02■□□□□ 0.32
SSH3-207ENST00000531495 MXD3Q9BW11 206 aa17.02■□□□□ 0.32
SSH3-207ENST00000531495 GREM2Q9H772 168 aa17.02■□□□□ 0.32
SSH3-207ENST00000531495 PAPPA2Q9BXP8 1791 aa17.02■□□□□ 0.31
SSH3-207ENST00000531495 SCN9AQ15858 1988 aa17■□□□□ 0.31
SSH3-207ENST00000531495 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
SSH3-207ENST00000531495 WTIPA6NIX2 430 aaPredicted RBP17■□□□□ 0.31
SSH3-207ENST00000531495 PPP1R12BO60237 982 aaPredicted RBP17■□□□□ 0.31
SSH3-207ENST00000531495 SASH1O94885 1247 aa17■□□□□ 0.31
SSH3-207ENST00000531495 KIAA0825Q8IV33 1275 aa17■□□□□ 0.31
SSH3-207ENST00000531495 CFHR5Q9BXR6 569 aa17■□□□□ 0.31
SSH3-207ENST00000531495 ANGEL1Q9UNK9 670 aaKnown RBP17■□□□□ 0.31
SSH3-207ENST00000531495 COL4A1P02462 1669 aa17■□□□□ 0.31
SSH3-207ENST00000531495 MANSC4A6NHS7 340 aaPredicted RBP16.99■□□□□ 0.31
SSH3-207ENST00000531495 IGKV5-2P06315 115 aa16.99■□□□□ 0.31
SSH3-207ENST00000531495 GTF2IP78347 998 aa16.99■□□□□ 0.31
SSH3-207ENST00000531495 DLGAP5Q15398 846 aa16.99■□□□□ 0.31
SSH3-207ENST00000531495 SPRYD7Q5W111 196 aa16.99■□□□□ 0.31
SSH3-207ENST00000531495 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
SSH3-207ENST00000531495 H7C1W4 665 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 MYO1BO43795 1136 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 LDLRAD1Q5T700 205 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 OTUD7BQ6GQQ9 843 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 UBE3BQ7Z3V4 1068 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 DEFB129Q9H1M3 183 aa16.98■□□□□ 0.31
SSH3-207ENST00000531495 NEURL1BA8MQ27 555 aa16.97■□□□□ 0.31
SSH3-207ENST00000531495 ITGA6P23229 1130 aa16.97■□□□□ 0.31
SSH3-207ENST00000531495 CWF19L2Q2TBE0 894 aaKnown RBP16.97■□□□□ 0.31
SSH3-207ENST00000531495 SUPT20HL1Q3ZLR7 823 aa16.97■□□□□ 0.31
SSH3-207ENST00000531495 INTS3Q68E01 1043 aaKnown RBP16.97■□□□□ 0.31
SSH3-207ENST00000531495 TXNRD3Q86VQ6 643 aa16.97■□□□□ 0.31
SSH3-207ENST00000531495 MYH16Q9H6N6 1097 aa16.97■□□□□ 0.31
SSH3-207ENST00000531495 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.97■□□□□ 0.31
SSH3-207ENST00000531495 UNCXA6NJT0 531 aa16.96■□□□□ 0.31
SSH3-207ENST00000531495 TRIM17Q9Y577 477 aa16.96■□□□□ 0.31
SSH3-207ENST00000531495 PPP2R3BQ9Y5P8 575 aa16.96■□□□□ 0.31
SSH3-207ENST00000531495 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
SSH3-207ENST00000531495 ZBTB48P10074 688 aaPredicted RBP16.95■□□□□ 0.3
SSH3-207ENST00000531495 TSPYL6Q8N831 410 aa16.95■□□□□ 0.3
SSH3-207ENST00000531495 PLA2G12BQ9BX93 195 aa16.95■□□□□ 0.3
SSH3-207ENST00000531495 CD209Q9NNX6 404 aa16.95■□□□□ 0.3
SSH3-207ENST00000531495 ANKRD18BA2A2Z9 1011 aa16.94■□□□□ 0.3
SSH3-207ENST00000531495 GCKRQ14397 625 aa16.94■□□□□ 0.3
SSH3-207ENST00000531495 IFNL1Q8IU54 200 aa16.94■□□□□ 0.3
SSH3-207ENST00000531495 ZBED3Q96IU2 234 aaPredicted RBP16.94■□□□□ 0.3
SSH3-207ENST00000531495 PRKRIP1Q9H875 184 aaPredicted RBP16.94■□□□□ 0.3
SSH3-207ENST00000531495 CSF1RP07333 972 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 IREB2P48200 963 aaKnown RBP16.93■□□□□ 0.3
SSH3-207ENST00000531495 CHRNDQ07001 517 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 MAP3K11Q16584 847 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 TWISTNBQ3B726 338 aaPredicted RBP16.93■□□□□ 0.3
SSH3-207ENST00000531495 ZNF804AQ7Z570 1209 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 MTMR14Q8NCE2 650 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 ERO1AQ96HE7 468 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 R3HDMLQ9H3Y0 253 aa16.93■□□□□ 0.3
SSH3-207ENST00000531495 RBM5P52756 815 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSH3-207ENST00000531495 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
SSH3-207ENST00000531495 KLRK1P26718 216 aa16.91■□□□□ 0.3
SSH3-207ENST00000531495 IFIT5Q13325 482 aaKnown RBP16.91■□□□□ 0.3
SSH3-207ENST00000531495 FKBP5Q13451 457 aaPredicted RBP16.91■□□□□ 0.3
SSH3-207ENST00000531495 ARHGEF6Q15052 776 aa16.91■□□□□ 0.3
SSH3-207ENST00000531495 OTOP1Q7RTM1 612 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms