RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PITPNM2Q9BZ72 1349 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 SCN9AQ15858 1988 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 FKTNO75072 461 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 TTLL5Q6EMB2 1281 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 METTL22Q9BUU2 404 aaPredicted RBP11.91□□□□□ -0.5
NEDD8-206ENST00000531430 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
NEDD8-206ENST00000531430 MINPP1Q9UNW1 487 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 MAP3K2Q9Y2U5 619 aa11.91□□□□□ -0.5
NEDD8-206ENST00000531430 LRRC37AA6NMS7 1700 aa11.9□□□□□ -0.5
NEDD8-206ENST00000531430 WNT10BO00744 389 aa11.9□□□□□ -0.5
NEDD8-206ENST00000531430 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.5
NEDD8-206ENST00000531430 FBXO46Q6PJ61 603 aaPredicted RBP11.9□□□□□ -0.5
NEDD8-206ENST00000531430 KIAA0825Q8IV33 1275 aa11.9□□□□□ -0.5
NEDD8-206ENST00000531430 SLC10A4Q96EP9 437 aa11.9□□□□□ -0.5
NEDD8-206ENST00000531430 R3HDMLQ9H3Y0 253 aa11.9□□□□□ -0.5
NEDD8-206ENST00000531430 IGHMBP2P38935 993 aaKnown RBP11.89□□□□□ -0.51
NEDD8-206ENST00000531430 KCNJ4P48050 445 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 GTF2IP78347 998 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 DACT2Q5SW24 774 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 C8orf58Q8NAV2 365 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 GREM2Q9H772 168 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 TRIM17Q9Y577 477 aa11.89□□□□□ -0.51
NEDD8-206ENST00000531430 PI4KAP2A4QPH2 592 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 APAF1O14727 1248 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 CTSWP56202 376 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 GNAI1P63096 354 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 NEXNQ0ZGT2 675 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 STRIP1Q5VSL9 837 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 TXNRD3Q86VQ6 643 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 PI4KAP1Q8N8J0 262 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 TTLL11Q8NHH1 800 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
NEDD8-206ENST00000531430 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
NEDD8-206ENST00000531430 MYBBP1AQ9BQG0 1328 aaKnown RBP11.87□□□□□ -0.51
NEDD8-206ENST00000531430 F8W031 263 aaPredicted RBP11.87□□□□□ -0.51
NEDD8-206ENST00000531430 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
NEDD8-206ENST00000531430 DLGAP5Q15398 846 aa11.87□□□□□ -0.51
NEDD8-206ENST00000531430 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
NEDD8-206ENST00000531430 KSR2Q6VAB6 950 aa11.87□□□□□ -0.51
NEDD8-206ENST00000531430 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
NEDD8-206ENST00000531430 MPHOSPH8Q99549 860 aa11.87□□□□□ -0.51
NEDD8-206ENST00000531430 LEMD3Q9Y2U8 911 aa11.87□□□□□ -0.51
NEDD8-206ENST00000531430 ZNF804BA4D1E1 1349 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 ALDH1A1P00352 501 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 RBM5P52756 815 aaKnown RBP eCLIP11.86□□□□□ -0.51
NEDD8-206ENST00000531430 CWF19L2Q2TBE0 894 aaKnown RBP11.86□□□□□ -0.51
NEDD8-206ENST00000531430 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 ANKRD2Q9GZV1 360 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 DEFB129Q9H1M3 183 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 IFT57Q9NWB7 429 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 PAPPA2Q9BXP8 1791 aa11.86□□□□□ -0.51
NEDD8-206ENST00000531430 MED23Q9ULK4 1368 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 PPP1R12BO60237 982 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-206ENST00000531430 IGKV5-2P06315 115 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 KLRK1P26718 216 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 INHBEP58166 350 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 HELBQ8NG08 1087 aaPredicted RBP11.85□□□□□ -0.51
NEDD8-206ENST00000531430 GCC1Q96CN9 775 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 STK31Q9BXU1 1019 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
NEDD8-206ENST00000531430 CLRN2A0PK11 232 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 MANSC4A6NHS7 340 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-206ENST00000531430 PLIN1O60240 522 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 ITGA6P23229 1130 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 TSPYL6Q8N831 410 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 CLMNQ96JQ2 1002 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 JAG2Q9Y219 1238 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
NEDD8-206ENST00000531430 SNAP23O00161 211 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 MYO1BO43795 1136 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 TAF5LO75529 589 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 MYCP01106 439 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-206ENST00000531430 SLC4A2P04920 1241 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 SUPT20HL1Q3ZLR7 823 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 NOM1Q5C9Z4 860 aaKnown RBP11.83□□□□□ -0.52
NEDD8-206ENST00000531430 OTUD7BQ6GQQ9 843 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 OTOP1Q7RTM1 612 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 CD99L2Q8TCZ2 262 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 CD209Q9NNX6 404 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 PCDHAC2Q9Y5I4 1007 aa11.83□□□□□ -0.52
NEDD8-206ENST00000531430 NEURL1BA8MQ27 555 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 H7C1W4 665 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 MMP14P50281 582 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 CHRNDQ07001 517 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 CFAP100Q494V2 611 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 NBPF12Q5TAG4 269 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-206ENST00000531430 INTS3Q68E01 1043 aaKnown RBP11.82□□□□□ -0.52
NEDD8-206ENST00000531430 G2E3Q7L622 706 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
NEDD8-206ENST00000531430 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
NEDD8-206ENST00000531430 WNK4Q96J92 1243 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms