RNA–Protein interactions for RNA: ENST00000531326.1

PTPN11-204, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 4

Gene PTPN11, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-204ENST00000531326 MINPP1Q9UNW1 487 aa22.81■■□□□ 1.24
PTPN11-204ENST00000531326 ZNF646O15015 1829 aaPredicted RBP22.8■■□□□ 1.24
PTPN11-204ENST00000531326 SCARF1Q14162 830 aa22.8■■□□□ 1.24
PTPN11-204ENST00000531326 SULF1Q8IWU6 871 aa22.8■■□□□ 1.24
PTPN11-204ENST00000531326 BSDC1Q9NW68 430 aaPredicted RBP22.8■■□□□ 1.24
PTPN11-204ENST00000531326 NEXNQ0ZGT2 675 aa22.79■■□□□ 1.24
PTPN11-204ENST00000531326 ANGEL2Q5VTE6 544 aaKnown RBP22.79■■□□□ 1.24
PTPN11-204ENST00000531326 PODNQ7Z5L7 613 aa22.79■■□□□ 1.24
PTPN11-204ENST00000531326 CDCA5Q96FF9 252 aa22.79■■□□□ 1.24
PTPN11-204ENST00000531326 MED23Q9ULK4 1368 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 USP17L3A6NCW0 530 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 USP17L4A6NCW7 530 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 H7C1W4 665 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 SLC4A2P04920 1241 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 USP17L1Q7RTZ2 530 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 UBE3BQ7Z3V4 1068 aa22.78■■□□□ 1.24
PTPN11-204ENST00000531326 VAMP4O75379 141 aa22.77■■□□□ 1.24
PTPN11-204ENST00000531326 USP17L8P0C7I0 530 aa22.77■■□□□ 1.24
PTPN11-204ENST00000531326 ZNF157P51786 506 aaPredicted RBP22.77■■□□□ 1.24
PTPN11-204ENST00000531326 CCDC102AQ96A19 550 aa22.77■■□□□ 1.24
PTPN11-204ENST00000531326 MYOZ2Q9NPC6 264 aa22.77■■□□□ 1.24
PTPN11-204ENST00000531326 CCDC85CA6NKD9 419 aa22.76■■□□□ 1.23
PTPN11-204ENST00000531326 CCT4P50991 539 aaKnown RBP22.76■■□□□ 1.23
PTPN11-204ENST00000531326 KIF23Q02241 960 aaPredicted RBP22.76■■□□□ 1.23
PTPN11-204ENST00000531326 MCOLN1Q9GZU1 580 aa22.76■■□□□ 1.23
PTPN11-204ENST00000531326 SLC10A3P09131 477 aa22.75■■□□□ 1.23
PTPN11-204ENST00000531326 CASP7P55210 303 aa22.75■■□□□ 1.23
PTPN11-204ENST00000531326 GCKRQ14397 625 aa22.75■■□□□ 1.23
PTPN11-204ENST00000531326 TXNRD3Q86VQ6 643 aa22.75■■□□□ 1.23
PTPN11-204ENST00000531326 MXD3Q9BW11 206 aa22.75■■□□□ 1.23
PTPN11-204ENST00000531326 SCAF8Q9UPN6 1271 aaKnown RBP22.75■■□□□ 1.23
PTPN11-204ENST00000531326 FLIIQ13045 1269 aa22.74■■□□□ 1.23
PTPN11-204ENST00000531326 DACT2Q5SW24 774 aa22.74■■□□□ 1.23
PTPN11-204ENST00000531326 PLA2G12BQ9BX93 195 aa22.74■■□□□ 1.23
PTPN11-204ENST00000531326 PITPNM2Q9BZ72 1349 aa22.74■■□□□ 1.23
PTPN11-204ENST00000531326 FAM161AQ3B820 660 aa22.73■■□□□ 1.23
PTPN11-204ENST00000531326 PAPPA2Q9BXP8 1791 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 ITGA6P23229 1130 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 NBPF9Q3BBW0 867 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 SAGE1Q9NXZ1 904 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 AKAP11Q9UKA4 1901 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 CACNA1FO60840 1977 aa22.72■■□□□ 1.23
PTPN11-204ENST00000531326 CSF1RP07333 972 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 KLRK1P26718 216 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 IGHMBP2P38935 993 aaKnown RBP22.71■■□□□ 1.23
PTPN11-204ENST00000531326 DGKZQ13574 1117 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 DNAAF4Q8WXU2 420 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 CSRNP1Q96S65 589 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 COA1Q9GZY4 146 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 LEMD3Q9Y2U8 911 aa22.71■■□□□ 1.23
PTPN11-204ENST00000531326 FKBP5Q13451 457 aaPredicted RBP22.7■■□□□ 1.22
PTPN11-204ENST00000531326 STRIP1Q5VSL9 837 aa22.7■■□□□ 1.22
PTPN11-204ENST00000531326 RASAL3Q86YV0 1011 aa22.7■■□□□ 1.22
PTPN11-204ENST00000531326 RNF186Q9NXI6 227 aa22.7■■□□□ 1.22
PTPN11-204ENST00000531326 ZNF804BA4D1E1 1349 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 TRPA1O75762 1119 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 RGS19P49795 217 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 PRAMEF18Q5VWM3 479 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 MOB2Q70IA6 237 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 LINS1Q8NG48 757 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 FBXW7Q969H0 707 aa22.69■■□□□ 1.22
PTPN11-204ENST00000531326 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
PTPN11-204ENST00000531326 WNT10BO00744 389 aa22.68■■□□□ 1.22
PTPN11-204ENST00000531326 FKBP1BP68106 108 aa22.68■■□□□ 1.22
PTPN11-204ENST00000531326 MYO3BQ8WXR4 1341 aa22.67■■□□□ 1.22
PTPN11-204ENST00000531326 MPHOSPH8Q99549 860 aa22.67■■□□□ 1.22
PTPN11-204ENST00000531326 ANKRD2Q9GZV1 360 aa22.67■■□□□ 1.22
PTPN11-204ENST00000531326 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
PTPN11-204ENST00000531326 TTLL5Q6EMB2 1281 aa22.66■■□□□ 1.22
PTPN11-204ENST00000531326 OGFOD1Q8N543 542 aa22.66■■□□□ 1.22
PTPN11-204ENST00000531326 A0A1B0GUL6 1792 aa22.66■■□□□ 1.22
PTPN11-204ENST00000531326 UBE2Q2LH0YL09 131 aa22.65■■□□□ 1.22
PTPN11-204ENST00000531326 SNAP23O00161 211 aa22.65■■□□□ 1.22
PTPN11-204ENST00000531326 SASH1O94885 1247 aa22.65■■□□□ 1.22
PTPN11-204ENST00000531326 CHRNDQ07001 517 aa22.65■■□□□ 1.22
PTPN11-204ENST00000531326 IRS2Q9Y4H2 1338 aa22.64■■□□□ 1.22
PTPN11-204ENST00000531326 FOXO4P98177 505 aa22.64■■□□□ 1.21
PTPN11-204ENST00000531326 MLLT1Q03111 559 aaPredicted RBP22.64■■□□□ 1.21
PTPN11-204ENST00000531326 F6X3S4 739 aa22.63■■□□□ 1.21
PTPN11-204ENST00000531326 GTF2IP78347 998 aa22.63■■□□□ 1.21
PTPN11-204ENST00000531326 KIAA0825Q8IV33 1275 aa22.63■■□□□ 1.21
PTPN11-204ENST00000531326 ANKRD18BA2A2Z9 1011 aa22.62■■□□□ 1.21
PTPN11-204ENST00000531326 BEND3Q5T5X7 828 aa22.62■■□□□ 1.21
PTPN11-204ENST00000531326 SSH1Q8WYL5 1049 aa22.62■■□□□ 1.21
PTPN11-204ENST00000531326 ZBED3Q96IU2 234 aaPredicted RBP22.62■■□□□ 1.21
PTPN11-204ENST00000531326 CD209Q9NNX6 404 aa22.62■■□□□ 1.21
PTPN11-204ENST00000531326 TAF5LO75529 589 aa22.61■■□□□ 1.21
PTPN11-204ENST00000531326 KCNJ4P48050 445 aa22.61■■□□□ 1.21
PTPN11-204ENST00000531326 MMP14P50281 582 aa22.61■■□□□ 1.21
PTPN11-204ENST00000531326 REM2Q8IYK8 340 aaPredicted RBP22.61■■□□□ 1.21
PTPN11-204ENST00000531326 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
PTPN11-204ENST00000531326 ALDH1L2Q3SY69 923 aa22.6■■□□□ 1.21
PTPN11-204ENST00000531326 CERS5Q8N5B7 392 aa22.6■■□□□ 1.21
PTPN11-204ENST00000531326 MRPL50Q8N5N7 158 aaKnown RBP22.6■■□□□ 1.21
PTPN11-204ENST00000531326 IFIT5Q13325 482 aaKnown RBP22.59■■□□□ 1.21
PTPN11-204ENST00000531326 TTLL12Q14166 644 aaPredicted RBP22.59■■□□□ 1.21
PTPN11-204ENST00000531326 EPHA10Q5JZY3 1008 aa22.59■■□□□ 1.21
PTPN11-204ENST00000531326 C15orf52Q6ZUT6 534 aaKnown RBP22.59■■□□□ 1.21
PTPN11-204ENST00000531326 HDAC9Q9UKV0 1011 aa22.59■■□□□ 1.21
PTPN11-204ENST00000531326 RARSP54136 660 aaKnown RBP22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms