RNA–Protein interactions for RNA: ENST00000531309.1

DKK3-210, Transcript of dickkopf WNT signaling pathway inhibitor 3, humanhuman

TSL 2

Gene DKK3, Length 707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3-210ENST00000531309 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.91□□□□□ -1.14
DKK3-210ENST00000531309 DEPDC4Q8N2C3 294 aa7.91□□□□□ -1.14
DKK3-210ENST00000531309 BAP1Q92560 729 aa7.91□□□□□ -1.14
DKK3-210ENST00000531309 CFAP53Q96M91 514 aa7.91□□□□□ -1.14
DKK3-210ENST00000531309 NOVA2Q9UNW9 492 aaKnown RBP7.91□□□□□ -1.14
DKK3-210ENST00000531309 TTC21BQ7Z4L5 1316 aa7.91□□□□□ -1.14
DKK3-210ENST00000531309 TTC21AQ8NDW8 1320 aa7.91□□□□□ -1.14
DKK3-210ENST00000531309 DICER1Q9UPY3 1922 aaKnown RBP7.91□□□□□ -1.14
DKK3-210ENST00000531309 TNRC18O15417 2968 aaPredicted RBP7.9□□□□□ -1.14
DKK3-210ENST00000531309 CNTNAP1P78357 1384 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 S1PR4O95977 384 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 TNNT2P45379 298 aaPredicted RBP7.9□□□□□ -1.14
DKK3-210ENST00000531309 NCOA4Q13772 614 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 WDR43Q15061 677 aaKnown RBP eCLIP7.9□□□□□ -1.14
DKK3-210ENST00000531309 AGERQ15109 404 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 TMCO4Q5TGY1 634 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 B4GALNT3Q6L9W6 998 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 ARHGEF25Q86VW2 580 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 COG3Q96JB2 828 aa7.9□□□□□ -1.14
DKK3-210ENST00000531309 RGPD2P0DJD1 1756 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 ZBED9Q6R2W3 1325 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 MAGEB6P1A0A0J9YX57 407 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L15C9J2P7 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L10C9JJH3 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L13C9JLJ4 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L12C9JPN9 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L11C9JVI0 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L21D6R901 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L18D6R9N7 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L22D6RA61 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L17D6RBQ6 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L19D6RCP7 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L20D6RJB6 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 RASA1P20936 1047 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 USP17L24Q0WX57 530 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 EML3Q32P44 896 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 NME9Q86XW9 330 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 CDAN1Q8IWY9 1227 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 ZNF511Q8NB15 262 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 NKX2-3Q8TAU0 364 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 ADAMTS8Q9UP79 889 aa7.89□□□□□ -1.15
DKK3-210ENST00000531309 FCF1Q9Y324 198 aaKnown RBP7.89□□□□□ -1.15
DKK3-210ENST00000531309 HSPA8P11142 646 aaKnown RBP7.88□□□□□ -1.15
DKK3-210ENST00000531309 TMEM164Q5U3C3 297 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 RNF20Q5VTR2 975 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 TRAF7Q6Q0C0 670 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 ZMIZ1Q9ULJ6 1067 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 C4AP0C0L4 1744 aa7.88□□□□□ -1.15
DKK3-210ENST00000531309 USP31Q70CQ4 1352 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 DPEP1P16444 411 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 MAP2K1Q02750 393 aaPredicted RBP7.87□□□□□ -1.15
DKK3-210ENST00000531309 PTK7Q13308 1070 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 LINC01559Q495D7 138 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 ERFEQ4G0M1 354 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 CRTC2Q53ET0 693 aaPredicted RBP7.87□□□□□ -1.15
DKK3-210ENST00000531309 STK32AQ8WU08 396 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 FOXJ1Q92949 421 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 CCDC87Q9NVE4 849 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 POLKQ9UBT6 870 aa7.87□□□□□ -1.15
DKK3-210ENST00000531309 GLTPD2A6NH11 291 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 MMP10P09238 476 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 VEGFBP49765 207 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 DALRD3Q5D0E6 543 aaKnown RBP7.86□□□□□ -1.15
DKK3-210ENST00000531309 SMIM5Q71RC9 77 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 NGEFQ8N5V2 710 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 FAM200AQ8TCP9 573 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 SLC10A4Q96EP9 437 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 PIM2Q9P1W9 311 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 CDV3Q9UKY7 258 aaKnown RBP7.86□□□□□ -1.15
DKK3-210ENST00000531309 DOLKQ9UPQ8 538 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 NOD1Q9Y239 953 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 NUDCQ9Y266 331 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 MAP2P11137 1827 aaKnown RBP7.86□□□□□ -1.15
DKK3-210ENST00000531309 NFAT5O94916 1531 aa7.86□□□□□ -1.15
DKK3-210ENST00000531309 DIAPH1O60610 1272 aaKnown RBP7.85□□□□□ -1.15
DKK3-210ENST00000531309 SSFA2P28290 1259 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 TSGA10IPQ3SY00 556 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 ANKMY2Q8IV38 441 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 C1QTNF2Q9BXJ5 285 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 SMG6Q86US8 1419 aaKnown RBP7.85□□□□□ -1.15
DKK3-210ENST00000531309 SCN4AP35499 1836 aa7.85□□□□□ -1.15
DKK3-210ENST00000531309 COL3A1P02461 1466 aaPredicted RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 ZBTB24O43167 697 aaPredicted RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 SH3BP2P78314 561 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 KCNC4Q03721 635 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 NBPF20Q3BBV1 942 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 POTEGQ6S5H5 508 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 NPM2Q86SE8 214 aaKnown RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 TRMT44Q8IYL2 757 aaKnown RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 OGFOD1Q8N543 542 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 ANKRD24Q8TF21 1146 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 DCAF5Q96JK2 942 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 CCDC85AQ96PX6 553 aaPredicted RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 PNNQ9H307 717 aaKnown RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 DNAAF2Q9NVR5 837 aaKnown RBP7.84□□□□□ -1.15
DKK3-210ENST00000531309 IVNS1ABPQ9Y6Y0 642 aa7.84□□□□□ -1.15
DKK3-210ENST00000531309 PALLDQ8WX93 1383 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms