RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 SASH1O94885 1247 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 IFIT2P09913 472 aaKnown RBP12.08□□□□□ -0.48
CTNND1-228ENST00000531007 GYS1P13807 737 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 ITGA6P23229 1130 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 RTL5Q5HYW3 569 aaPredicted RBP12.08□□□□□ -0.48
CTNND1-228ENST00000531007 TTC22Q5TAA0 569 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 TICAM2Q86XR7 235 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 NLRP3Q96P20 1036 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 CDC5LQ99459 802 aaKnown RBP12.08□□□□□ -0.48
CTNND1-228ENST00000531007 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 KRTAP3-2Q9BYR7 98 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
CTNND1-228ENST00000531007 PA2G4Q9UQ80 394 aaKnown RBP12.08□□□□□ -0.48
CTNND1-228ENST00000531007 QSER1Q2KHR3 1735 aa12.08□□□□□ -0.48
CTNND1-228ENST00000531007 PSDA5PKW4 1024 aaPredicted RBP12.07□□□□□ -0.48
CTNND1-228ENST00000531007 GLRX3O76003 335 aaKnown RBP12.07□□□□□ -0.48
CTNND1-228ENST00000531007 TM4SF1P30408 202 aa12.07□□□□□ -0.48
CTNND1-228ENST00000531007 EZH2Q15910 746 aaKnown RBP12.07□□□□□ -0.48
CTNND1-228ENST00000531007 CEP126Q9P2H0 1117 aa12.07□□□□□ -0.48
CTNND1-228ENST00000531007 MROH5Q6ZUA9 1318 aa12.07□□□□□ -0.48
CTNND1-228ENST00000531007 NPHP1O15259 732 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 SMARCA5O60264 1052 aaPredicted RBP12.06□□□□□ -0.48
CTNND1-228ENST00000531007 IGHMBP2P38935 993 aaKnown RBP12.06□□□□□ -0.48
CTNND1-228ENST00000531007 ST5P78524 1137 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 NFIXQ14938 502 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 CASC1Q6TDU7 716 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 LDHAL6AQ6ZMR3 332 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 AMIGO3Q86WK7 504 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 SIL1Q9H173 461 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 GREM2Q9H772 168 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 ECHDC1Q9NTX5 307 aa12.06□□□□□ -0.48
CTNND1-228ENST00000531007 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
CTNND1-228ENST00000531007 HCLS1P14317 486 aaPredicted RBP12.05□□□□□ -0.48
CTNND1-228ENST00000531007 ZNF827Q17R98 1081 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 C8orf34Q49A92 452 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 TNNI3KQ59H18 835 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 BICDL1Q6ZP65 573 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 AACSQ86V21 672 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 C16orf71Q8IYS4 520 aaPredicted RBP12.05□□□□□ -0.48
CTNND1-228ENST00000531007 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 MPHOSPH8Q99549 860 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 CNNM1Q9NRU3 951 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 FPGT-TNNI3KV9GXZ4 949 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 ABCC12Q96J65 1359 aa12.05□□□□□ -0.48
CTNND1-228ENST00000531007 LRP5O75197 1615 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 SERPINB2P05120 415 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 COL23A1Q86Y22 540 aaPredicted RBP12.04□□□□□ -0.48
CTNND1-228ENST00000531007 NUTM1Q86Y26 1132 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 SYNE4Q8N205 404 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 UPF2Q9HAU5 1272 aaKnown RBP12.04□□□□□ -0.48
CTNND1-228ENST00000531007 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
CTNND1-228ENST00000531007 FAM177BA6PVY3 158 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 CDC45O75419 566 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 TFCP2Q12800 502 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.03□□□□□ -0.48
CTNND1-228ENST00000531007 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
CTNND1-228ENST00000531007 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 PNPLA7Q6ZV29 1317 aa12.03□□□□□ -0.48
CTNND1-228ENST00000531007 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
CTNND1-228ENST00000531007 PDE8BO95263 885 aa12.02□□□□□ -0.49
CTNND1-228ENST00000531007 GSPT1P15170 499 aaKnown RBP12.02□□□□□ -0.49
CTNND1-228ENST00000531007 METTL24Q5JXM2 366 aa12.02□□□□□ -0.49
CTNND1-228ENST00000531007 DDX46Q7L014 1031 aaKnown RBP12.02□□□□□ -0.49
CTNND1-228ENST00000531007 CNTROBQ8N137 903 aa12.02□□□□□ -0.49
CTNND1-228ENST00000531007 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.49
CTNND1-228ENST00000531007 BSDC1Q9NW68 430 aaPredicted RBP12.02□□□□□ -0.49
CTNND1-228ENST00000531007 KLRG2A4D1S0 409 aaPredicted RBP12.01□□□□□ -0.49
CTNND1-228ENST00000531007 HIP1O00291 1037 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 ATP5JP18859 108 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 CRY2Q49AN0 593 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 LRRC24Q50LG9 513 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 PRR5LQ6MZQ0 368 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 PI4K2BQ8TCG2 481 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 EVI5LQ96CN4 794 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 ZNF594Q96JF6 807 aaPredicted RBP12.01□□□□□ -0.49
CTNND1-228ENST00000531007 ZNF512BQ96KM6 892 aaPredicted RBP12.01□□□□□ -0.49
CTNND1-228ENST00000531007 BRIP1Q9BX63 1249 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 PARP3Q9Y6F1 533 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 ZNF609O15014 1411 aa12.01□□□□□ -0.49
CTNND1-228ENST00000531007 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 EPB41L2O43491 1005 aaKnown RBP12□□□□□ -0.49
CTNND1-228ENST00000531007 SDSP20132 328 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 PBX2P40425 430 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 PUM3Q15397 648 aaKnown RBP12□□□□□ -0.49
CTNND1-228ENST00000531007 SMIM5Q71RC9 77 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 LPIN2Q92539 896 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 CCDC85AQ96PX6 553 aaPredicted RBP12□□□□□ -0.49
CTNND1-228ENST00000531007 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
CTNND1-228ENST00000531007 NRXN2Q9P2S2 1712 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms