RNA–Protein interactions for RNA: ENST00000530843.1

NUP214-223, Transcript of nucleoporin 214, human

TSL 5

Gene NUP214, Length 189 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP214-223	ENST00000530843	ZKSCAN3	Q9BRR0	538 aa		7.11	□□□□□ -1.27
NUP214-223	ENST00000530843	SMNDC1	O75940	238 aa	Known RBP eCLIP	7.1	□□□□□ -1.27	1e-9	■□□□□ 10.8
NUP214-223	ENST00000530843	MAPK1	P28482	360 aa		7.1	□□□□□ -1.27
NUP214-223	ENST00000530843	TMC1	Q8TDI8	760 aa		7.1	□□□□□ -1.27
NUP214-223	ENST00000530843	OSMR	Q99650	979 aa		7.1	□□□□□ -1.27
NUP214-223	ENST00000530843	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.1	□□□□□ -1.27
NUP214-223	ENST00000530843	SELP	P16109	830 aa		7.09	□□□□□ -1.27
NUP214-223	ENST00000530843	GPAT2	Q6NUI2	795 aa		7.09	□□□□□ -1.27
NUP214-223	ENST00000530843	TXNDC11	Q6PKC3	985 aa		7.09	□□□□□ -1.27
NUP214-223	ENST00000530843	SHISA2	Q6UWI4	295 aa		7.09	□□□□□ -1.27
NUP214-223	ENST00000530843	GALNT12	Q8IXK2	581 aa		7.09	□□□□□ -1.27
NUP214-223	ENST00000530843	PATL2	C9JE40	543 aa	Known RBP	7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	LINC01387	J3KSC0	135 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	PDE2A	O00408	941 aa	Predicted RBP	7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	TM4SF5	O14894	197 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	PROC	P04070	461 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	EDN3	P14138	238 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	ELN	P15502	786 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	EPHA1	P21709	976 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	RAC1	P63000	192 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	DSC3	Q14574	896 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	SETDB1	Q15047	1291 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	DTWD1	Q8N5C7	304 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	TMEM102	Q8N9M5	508 aa	Predicted RBP	7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	NXPE3	Q969Y0	559 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	ALKBH8	Q96BT7	664 aa	Known RBP	7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	DMRTB1	Q96MA1	342 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	ADAM19	Q9H013	955 aa		7.08	□□□□□ -1.28
NUP214-223	ENST00000530843	EIF1AY	O14602	144 aa	Known RBP	7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	CPNE3	O75131	537 aa	Known RBP	7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	CDC27	P30260	824 aa		7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	CDC25B	P30305	580 aa		7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	FBXO11	Q86XK2	927 aa		7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	SPOCK3	Q9BQ16	436 aa		7.07	□□□□□ -1.28
NUP214-223	ENST00000530843	NPHS2	Q9NP85	383 aa		7.07	□□□□□ -1.28
NUP214-223	ENST00000530843		A0A1W2PP55	124 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	METTL12	A8MUP2	240 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	DLL1	O00548	723 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	TREH	O43280	583 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	PTPRA	P18433	802 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	CACTIN-AS1	Q8N1I8	211 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	GALNT11	Q8NCW6	608 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	CSRNP1	Q96S65	589 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	SOX13	Q9UN79	622 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	PPME1	Q9Y570	386 aa		7.06	□□□□□ -1.28
NUP214-223	ENST00000530843	APBA3	O96018	575 aa		7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	NEFL	P07196	543 aa		7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	SND1	Q7KZF4	910 aa	Known RBP eCLIP	7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	CCDC74A	Q96AQ1	378 aa		7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	TCF12	Q99081	682 aa		7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	DNAJC25	Q9H1X3	360 aa		7.05	□□□□□ -1.28
NUP214-223	ENST00000530843	HGSNAT	Q68CP4	663 aa		7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	VN1R5	Q7Z5H4	357 aa		7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	LENG1	Q96BZ8	264 aa	Predicted RBP	7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	ASB16	Q96NS5	453 aa		7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	CARD10	Q9BWT7	1032 aa		7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	BHLHE41	Q9C0J9	482 aa	Predicted RBP	7.04	□□□□□ -1.28
NUP214-223	ENST00000530843	MSTN	O14793	375 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	GRIA4	P48058	902 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	ADGRE1	Q14246	886 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	MBTPS1	Q14703	1052 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	KIAA0319	Q5VV43	1072 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	PI16	Q6UXB8	463 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	CCNJL	Q8IV13	435 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	ASAP3	Q8TDY4	903 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	EPS8L3	Q8TE67	593 aa	Known RBP	7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	SETDB2	Q96T68	719 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	MUC3B	Q9H195	1237 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	KCNK4	Q9NYG8	393 aa		7.03	□□□□□ -1.28
NUP214-223	ENST00000530843	C9orf172	C9J069	976 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843		H3BRJ5	948 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	FSCN2	O14926	492 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	IGHA1	P01876	353 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	PLCB3	Q01970	1234 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	FMR1	Q06787	632 aa	Known RBP eCLIP	7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	SPRED3	Q2MJR0	410 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	BSND	Q8WZ55	320 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	NACC1	Q96RE7	527 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	LIN7B	Q9HAP6	207 aa		7.02	□□□□□ -1.29
NUP214-223	ENST00000530843	PNMA6F	A0A0J9YX94	578 aa		7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	DDX3Y	O15523	660 aa	Known RBP	7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	WISP1	O95388	367 aa		7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	ENOX2	Q16206	610 aa	Known RBP	7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	IGF2-AS	Q6U949	168 aa		7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	KLHDC7B	Q96G42	594 aa		7.01	□□□□□ -1.29
NUP214-223	ENST00000530843	SRA1	Q9HD15	236 aa	Known RBP	7.01	□□□□□ -1.29
NUP214-223	ENST00000530843		A0A096LPE4	126 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843		A0A1W2PPZ6	126 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	SOX1	O00570	391 aa	Predicted RBP	7	□□□□□ -1.29
NUP214-223	ENST00000530843	ADAM11	O75078	769 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	GATA4	P43694	442 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	MAP4K3	Q8IVH8	894 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	GLIS3	Q8NEA6	775 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	7	□□□□□ -1.29
NUP214-223	ENST00000530843	GZF1	Q9H116	711 aa	Predicted RBP	7	□□□□□ -1.29
NUP214-223	ENST00000530843	EHD4	Q9H223	541 aa		7	□□□□□ -1.29
NUP214-223	ENST00000530843	USP21	Q9UK80	565 aa		7	□□□□□ -1.29

Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms