RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 PPP4R2Q9NY27 417 aa6.93□□□□□ -1.3
VPS11-204ENST00000530809 UBE2Q2LH0YL09 131 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 UFL1O94874 794 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 FXR1P51114 621 aaKnown RBP eCLIP6.92□□□□□ -1.3
VPS11-204ENST00000530809 RPS8P62241 208 aaKnown RBP6.92□□□□□ -1.3
VPS11-204ENST00000530809 AIMP1Q12904 312 aaKnown RBP6.92□□□□□ -1.3
VPS11-204ENST00000530809 TTLL12Q14166 644 aaPredicted RBP6.92□□□□□ -1.3
VPS11-204ENST00000530809 PROSER3Q2NL68 480 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 ARMC9Q7Z3E5 817 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 PLBD2Q8NHP8 589 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 XAGE3Q8WTP9 111 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 PLEKHF1Q96S99 279 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 ANKIB1Q9P2G1 1089 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 GGA1Q9UJY5 639 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 ASTN2O75129 1339 aaPredicted RBP6.92□□□□□ -1.3
VPS11-204ENST00000530809 MYO3BQ8WXR4 1341 aa6.92□□□□□ -1.3
VPS11-204ENST00000530809 USP17L3A6NCW0 530 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 USP17L4A6NCW7 530 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 MANSC4A6NHS7 340 aaPredicted RBP6.91□□□□□ -1.3
VPS11-204ENST00000530809 ANXA1P04083 346 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 LMOD3Q0VAK6 560 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 OTOP1Q7RTM1 612 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 USP17L1Q7RTZ2 530 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 APOBEC3FQ8IUX4 373 aaKnown RBP6.91□□□□□ -1.3
VPS11-204ENST00000530809 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 FAM89AQ96GI7 184 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 ERO1AQ96HE7 468 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 GMLQ99445 158 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 ISCA1Q9BUE6 129 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 TRIM17Q9Y577 477 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 XDHP47989 1333 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 OTOFQ9HC10 1997 aa6.91□□□□□ -1.3
VPS11-204ENST00000530809 POTEFA5A3E0 1075 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 UNCXA6NJT0 531 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 IRS4O14654 1257 aaPredicted RBP6.9□□□□□ -1.3
VPS11-204ENST00000530809 HOXB7P09629 217 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 ZBTB48P10074 688 aaPredicted RBP6.9□□□□□ -1.3
VPS11-204ENST00000530809 TRIM28Q13263 835 aaKnown RBP6.9□□□□□ -1.3
VPS11-204ENST00000530809 SPRYD7Q5W111 196 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 OTUD7BQ6GQQ9 843 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 ANKRD13DQ6ZTN6 518 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 MOB2Q70IA6 237 aa6.9□□□□□ -1.3
VPS11-204ENST00000530809 KIAA0100Q14667 2235 aaKnown RBP6.9□□□□□ -1.3
VPS11-204ENST00000530809 MED23Q9ULK4 1368 aa6.9□□□□□ -1.31
VPS11-204ENST00000530809 WNT10BO00744 389 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 ATP2B4P23634 1241 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 PTPN12Q05209 780 aaKnown RBP6.89□□□□□ -1.31
VPS11-204ENST00000530809 ARHGEF6Q15052 776 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 NBPF9Q3BBW0 867 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 CCDC152Q4G0S7 254 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 LDLRAD1Q5T700 205 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 IFNL1Q8IU54 200 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 PLCD3Q8N3E9 789 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 ZBTB38Q8NAP3 1195 aaPredicted RBP6.89□□□□□ -1.31
VPS11-204ENST00000530809 ARMC5Q96C12 935 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 TMEM106CQ9BVX2 250 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 HYPKQ9NX55 129 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 DBF4Q9UBU7 674 aaPredicted RBP6.89□□□□□ -1.31
VPS11-204ENST00000530809 PTPN22Q9Y2R2 807 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 ZNF521Q96K83 1311 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 A0A1B0GUL6 1792 aa6.89□□□□□ -1.31
VPS11-204ENST00000530809 PPP1R12BO60237 982 aaPredicted RBP6.88□□□□□ -1.31
VPS11-204ENST00000530809 PDE8AO60658 829 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 RIPK4P57078 832 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 MKRN3Q13064 507 aaKnown RBP6.88□□□□□ -1.31
VPS11-204ENST00000530809 MAP3K11Q16584 847 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 HDGFL1Q5TGJ6 251 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 STRIP1Q5VSL9 837 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 NBPF11Q86T75 865 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 ANKRD18AQ8IVF6 992 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 SLC10A4Q96EP9 437 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 CHPF2Q9P2E5 772 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 RCAN3Q9UKA8 241 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 ANGEL1Q9UNK9 670 aaKnown RBP6.88□□□□□ -1.31
VPS11-204ENST00000530809 PPP2R3BQ9Y5P8 575 aa6.88□□□□□ -1.31
VPS11-204ENST00000530809 ARAP2Q8WZ64 1704 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 ATP5J2-PTCD1G3V325 749 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 RRP1P56182 461 aaKnown RBP6.87□□□□□ -1.31
VPS11-204ENST00000530809 RTL5Q5HYW3 569 aaPredicted RBP6.87□□□□□ -1.31
VPS11-204ENST00000530809 DACT2Q5SW24 774 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.87□□□□□ -1.31
VPS11-204ENST00000530809 CCDC191Q8NCU4 936 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 SPOCK2Q92563 424 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 WNK4Q96J92 1243 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 CDC5LQ99459 802 aaKnown RBP6.87□□□□□ -1.31
VPS11-204ENST00000530809 COA1Q9GZY4 146 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 R3HDMLQ9H3Y0 253 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 EFCC1Q9HA90 598 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 SEC31BQ9NQW1 1179 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 ADAMTS8Q9UP79 889 aa6.87□□□□□ -1.31
VPS11-204ENST00000530809 COLQQ9Y215 455 aaPredicted RBP6.87□□□□□ -1.31
VPS11-204ENST00000530809 CACNA1FO60840 1977 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 E9PSI1 815 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 CHL1O00533 1208 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 PCCAP05165 728 aaPredicted RBP6.86□□□□□ -1.31
VPS11-204ENST00000530809 EN2P19622 333 aaPredicted RBP6.86□□□□□ -1.31
VPS11-204ENST00000530809 SP3Q02447 781 aa6.86□□□□□ -1.31
VPS11-204ENST00000530809 GOLGA2Q08379 1002 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms