RNA–Protein interactions for RNA: ENST00000530785.5

LTBP3-217, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2 BASIC

Gene LTBP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-217ENST00000530785 MAP3K11Q16584 847 aa22.49■■□□□ 1.19
LTBP3-217ENST00000530785 ATG9AQ7Z3C6 839 aa22.49■■□□□ 1.19
LTBP3-217ENST00000530785 TMOD3Q9NYL9 352 aa22.49■■□□□ 1.19
LTBP3-217ENST00000530785 CCDC83Q8IWF9 413 aa22.48■■□□□ 1.19
LTBP3-217ENST00000530785 SMC3Q9UQE7 1217 aa22.48■■□□□ 1.19
LTBP3-217ENST00000530785 ZNF215Q9UL58 517 aaPredicted RBP22.48■■□□□ 1.19
LTBP3-217ENST00000530785 MTMR6Q9Y217 621 aa22.48■■□□□ 1.19
LTBP3-217ENST00000530785 TAF6LQ9Y6J9 622 aa22.48■■□□□ 1.19
LTBP3-217ENST00000530785 NUTM2BA6NNL0 878 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-217ENST00000530785 NUTM2EB1AL46 878 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-217ENST00000530785 FBXO38Q6PIJ6 1188 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 NUTM2AQ8IVF1 878 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-217ENST00000530785 DRC7Q8IY82 874 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 CACTINQ8WUQ7 758 aaKnown RBP22.47■■□□□ 1.19
LTBP3-217ENST00000530785 CBX8Q9HC52 389 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 ADAMTS2O95450 1211 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 HAUS7Q99871 368 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 SH2B1Q9NRF2 756 aaPredicted RBP22.47■■□□□ 1.19
LTBP3-217ENST00000530785 RFX7Q2KHR2 1363 aa22.47■■□□□ 1.19
LTBP3-217ENST00000530785 ZNF609O15014 1411 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 TAF5LO75529 589 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 CHGBP05060 677 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 ST3GAL1Q11201 340 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 RNF20Q5VTR2 975 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 TDRD7Q8NHU6 1098 aaKnown RBP22.46■■□□□ 1.19
LTBP3-217ENST00000530785 ZSCAN31Q96LW9 406 aaPredicted RBP22.46■■□□□ 1.19
LTBP3-217ENST00000530785 NUP62CLQ9H1M0 184 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 ERICH4A6NGS2 130 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 ERO1AQ96HE7 468 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 TSPYL1Q9H0U9 437 aa22.46■■□□□ 1.19
LTBP3-217ENST00000530785 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
LTBP3-217ENST00000530785 COL22A1Q8NFW1 1626 aaPredicted RBP22.45■■□□□ 1.18
LTBP3-217ENST00000530785 PSMA5P28066 241 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 ME3Q16798 604 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 ZNF330Q9Y3S2 320 aaPredicted RBP22.45■■□□□ 1.18
LTBP3-217ENST00000530785 DTNBO60941 627 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 CYP2C19P33261 490 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 NYAP1Q6ZVC0 841 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 DDX46Q7L014 1031 aaKnown RBP22.45■■□□□ 1.18
LTBP3-217ENST00000530785 PLCD3Q8N3E9 789 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 TRIM5Q9C035 493 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 ASAP1Q9ULH1 1129 aa22.45■■□□□ 1.18
LTBP3-217ENST00000530785 CDC25BP30305 580 aa22.44■■□□□ 1.18
LTBP3-217ENST00000530785 ZNF594Q96JF6 807 aaPredicted RBP22.44■■□□□ 1.18
LTBP3-217ENST00000530785 BTG4Q9NY30 223 aa22.44■■□□□ 1.18
LTBP3-217ENST00000530785 GJB2P29033 226 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 ANO6Q4KMQ2 910 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 TPCN1Q9ULQ1 816 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 IL15P40933 162 aaPredicted RBP22.43■■□□□ 1.18
LTBP3-217ENST00000530785 LRRC24Q50LG9 513 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 BLOC1S2Q6QNY1 142 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 PIGBQ92521 554 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 NEUROD6Q96NK8 337 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 ISCA1Q9BUE6 129 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 HMG20BQ9P0W2 317 aa22.43■■□□□ 1.18
LTBP3-217ENST00000530785 DNAJC10Q8IXB1 793 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 ZNF592Q92610 1267 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 TCEANC2Q96MN5 208 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 SEC62Q99442 399 aaKnown RBP22.42■■□□□ 1.18
LTBP3-217ENST00000530785 ST7Q9NRC1 585 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 ZNF446Q9NWS9 450 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 CCDC144BQ3MJ40 725 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 USPL1Q5W0Q7 1092 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 CCDC129Q6ZRS4 1044 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 RBM43Q6ZSC3 357 aaKnown RBP22.42■■□□□ 1.18
LTBP3-217ENST00000530785 CCDC144CPQ8IYA2 1237 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 NECAB1Q8N987 351 aa22.42■■□□□ 1.18
LTBP3-217ENST00000530785 ITGB4P16144 1822 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 EYA2O00167 538 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 TIMM10P62072 90 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 ELF2Q15723 593 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 GPR108Q9NPR9 543 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 CLIP2Q9UDT6 1046 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 ELP1O95163 1332 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 LIG1P18858 919 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 RPS6KB1P23443 525 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 TCIRG1Q13488 830 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 KBTBD3Q8NAB2 608 aa22.41■■□□□ 1.18
LTBP3-217ENST00000530785 HSPA1LP34931 641 aa22.4■■□□□ 1.18
LTBP3-217ENST00000530785 TSGA10IPQ3SY00 556 aa22.4■■□□□ 1.18
LTBP3-217ENST00000530785 TTC6Q86TZ1 520 aa22.4■■□□□ 1.18
LTBP3-217ENST00000530785 NOL10Q9BSC4 688 aaKnown RBP22.4■■□□□ 1.18
LTBP3-217ENST00000530785 PALLDQ8WX93 1383 aa22.39■■□□□ 1.18
LTBP3-217ENST00000530785 NEMFO60524 1076 aa22.39■■□□□ 1.18
LTBP3-217ENST00000530785 PTPN14Q15678 1187 aa22.39■■□□□ 1.18
LTBP3-217ENST00000530785 CAMK4Q16566 473 aa22.39■■□□□ 1.18
LTBP3-217ENST00000530785 PUS3Q9BZE2 481 aaKnown RBP22.39■■□□□ 1.18
LTBP3-217ENST00000530785 ATG3Q9NT62 314 aa22.39■■□□□ 1.18
LTBP3-217ENST00000530785 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.39■■□□□ 1.18
LTBP3-217ENST00000530785 V9GYY5 206 aaPredicted RBP22.39■■□□□ 1.18
LTBP3-217ENST00000530785 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.39■■□□□ 1.17
LTBP3-217ENST00000530785 USP27XA6NNY8 438 aa22.39■■□□□ 1.17
LTBP3-217ENST00000530785 MCMDC2Q4G0Z9 681 aa22.39■■□□□ 1.17
LTBP3-217ENST00000530785 LRRC8AQ8IWT6 810 aa22.39■■□□□ 1.17
LTBP3-217ENST00000530785 GOLIM4O00461 696 aa22.38■■□□□ 1.17
LTBP3-217ENST00000530785 CIAO1O76071 339 aa22.38■■□□□ 1.17
LTBP3-217ENST00000530785 TOB2Q14106 344 aaPredicted RBP22.38■■□□□ 1.17
LTBP3-217ENST00000530785 BMS1Q14692 1282 aaKnown RBP22.38■■□□□ 1.17
LTBP3-217ENST00000530785 TNMDQ9H2S6 317 aa22.38■■□□□ 1.17
LTBP3-217ENST00000530785 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms