RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 SALL3Q9BXA9 1300 aa13.06□□□□□ -0.32
SOX6-213ENST00000530378 UFL1O94874 794 aa13.06□□□□□ -0.32
SOX6-213ENST00000530378 TTLL6Q8N841 843 aa13.06□□□□□ -0.32
SOX6-213ENST00000530378 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
SOX6-213ENST00000530378 XDHP47989 1333 aa13.06□□□□□ -0.32
SOX6-213ENST00000530378 SLC5A1P13866 664 aa13.05□□□□□ -0.32
SOX6-213ENST00000530378 FGFR2P21802 821 aa13.05□□□□□ -0.32
SOX6-213ENST00000530378 ANKRD2Q9GZV1 360 aa13.05□□□□□ -0.32
SOX6-213ENST00000530378 IQSEC3Q9UPP2 1182 aaPredicted RBP13.05□□□□□ -0.32
SOX6-213ENST00000530378 CD2APQ9Y5K6 639 aa13.05□□□□□ -0.32
SOX6-213ENST00000530378 ZNF804BA4D1E1 1349 aa13.05□□□□□ -0.32
SOX6-213ENST00000530378 GYG1P46976 350 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 TGFB2P61812 414 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 LPIN2Q92539 896 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 GPR108Q9NPR9 543 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 C6orf229H3BNL8 230 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 GSPT1P15170 499 aaKnown RBP13.04□□□□□ -0.32
SOX6-213ENST00000530378 PHKA1P46020 1223 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 ECHDC1Q9NTX5 307 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 PIM2Q9P1W9 311 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
SOX6-213ENST00000530378 MYO5AQ9Y4I1 1855 aaKnown RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 RIMBP2O15034 1052 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 IFIT1P09914 478 aaKnown RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 BCAMP50895 628 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 DALRD3Q5D0E6 543 aaKnown RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 TTC39AQ5SRH9 613 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 TTC22Q5TAA0 569 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 PI16Q6UXB8 463 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 DPP8Q6V1X1 898 aaPredicted RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 MPNDQ8N594 471 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 DNAJC2Q99543 621 aaKnown RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 TMX4Q9H1E5 349 aaPredicted RBP13.03□□□□□ -0.32
SOX6-213ENST00000530378 BOLA2Q9H3K6 86 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 SNRKQ9NRH2 765 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 POLLQ9UGP5 575 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 AKAP11Q9UKA4 1901 aa13.03□□□□□ -0.32
SOX6-213ENST00000530378 SCARF1Q14162 830 aa13.02□□□□□ -0.32
SOX6-213ENST00000530378 TMC4Q7Z404 712 aa13.02□□□□□ -0.32
SOX6-213ENST00000530378 TBC1D16Q8TBP0 767 aa13.02□□□□□ -0.32
SOX6-213ENST00000530378 EDC3Q96F86 508 aaKnown RBP13.02□□□□□ -0.32
SOX6-213ENST00000530378 JAG2Q9Y219 1238 aa13.02□□□□□ -0.32
SOX6-213ENST00000530378 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
SOX6-213ENST00000530378 CCDC102BQ68D86 513 aa13.02□□□□□ -0.33
SOX6-213ENST00000530378 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
SOX6-213ENST00000530378 STAP2Q9UGK3 403 aa13.02□□□□□ -0.33
SOX6-213ENST00000530378 ARFGEF1Q9Y6D6 1849 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 VPS37DQ86XT2 251 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 C7orf43Q8WVR3 580 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 TTC41PQ6P2S7 1318 aa13.01□□□□□ -0.33
SOX6-213ENST00000530378 CHD4Q14839 1912 aa13□□□□□ -0.33
SOX6-213ENST00000530378 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
SOX6-213ENST00000530378 RILPL2Q969X0 211 aa13□□□□□ -0.33
SOX6-213ENST00000530378 SYT17Q9BSW7 474 aa13□□□□□ -0.33
SOX6-213ENST00000530378 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
SOX6-213ENST00000530378 SNED1Q8TER0 1413 aa13□□□□□ -0.33
SOX6-213ENST00000530378 ERC2O15083 957 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 ATP2B4P23634 1241 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 MCAMP43121 646 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 FKBP4Q02790 459 aaKnown RBP eCLIP12.99□□□□□ -0.33
SOX6-213ENST00000530378 CCDC93Q567U6 631 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 FAM84BQ96KN1 310 aaPredicted RBP12.99□□□□□ -0.33
SOX6-213ENST00000530378 PODXL2Q9NZ53 605 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 LEMD3Q9Y2U8 911 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 CCDC88AQ3V6T2 1871 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 IRS2Q9Y4H2 1338 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
SOX6-213ENST00000530378 RASGRF1Q13972 1273 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 OSBPL3Q9H4L5 887 aa12.99□□□□□ -0.33
SOX6-213ENST00000530378 AOX1Q06278 1338 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 GOLIM4O00461 696 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 ATP5JP18859 108 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 SDSP20132 328 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
SOX6-213ENST00000530378 CAVIN4Q5BKX8 364 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
SOX6-213ENST00000530378 MYH7P12883 1935 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 MED23Q9ULK4 1368 aa12.98□□□□□ -0.33
SOX6-213ENST00000530378 FRAT2O75474 233 aaPredicted RBP12.97□□□□□ -0.33
SOX6-213ENST00000530378 HIBADHP31937 336 aaKnown RBP12.97□□□□□ -0.33
SOX6-213ENST00000530378 ZAP70P43403 619 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 AOC3Q16853 763 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 BMP2KLQ5H9B9 411 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 ANTXR1Q9H6X2 564 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 DBNDD1Q9H9R9 158 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 SCN9AQ15858 1988 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 ARID4AP29374 1257 aaPredicted RBP12.97□□□□□ -0.33
SOX6-213ENST00000530378 RASSF7Q02833 373 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 ZNF804AQ7Z570 1209 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 FBXW7Q969H0 707 aa12.97□□□□□ -0.33
SOX6-213ENST00000530378 HMG20BQ9P0W2 317 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms