RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 MFAP1P55081 439 aaKnown RBP8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 ZNF438Q7Z4V0 828 aa8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 CNTLNQ9NXG0 1405 aa8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 GPR182O15218 404 aa8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 TREML4Q6UXN2 200 aa8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 SYT9Q86SS6 491 aa8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.03□□□□□ -1.12
AMBRA1-209ENST00000529963 ITSN2Q9NZM3 1697 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 RARAP10276 462 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 TBC1D8BQ0IIM8 1120 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 FAM182BQ5T319 152 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 RBCK1Q9BYM8 510 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 NIF3L1Q9GZT8 377 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 ELP3Q9H9T3 547 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 KLF15Q9UIH9 416 aa8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 FOXD3Q9UJU5 478 aaPredicted RBP8.02□□□□□ -1.13
AMBRA1-209ENST00000529963 EGFRP00533 1210 aa8.01□□□□□ -1.13
AMBRA1-209ENST00000529963 USP5P45974 858 aa8.01□□□□□ -1.13
AMBRA1-209ENST00000529963 FAM129BQ96TA1 746 aa8.01□□□□□ -1.13
AMBRA1-209ENST00000529963 SPAG9O60271 1321 aaKnown RBP8□□□□□ -1.13
AMBRA1-209ENST00000529963 CDC42BPAQ5VT25 1732 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 ADAMTS2O95450 1211 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 IGHA2P01877 340 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
AMBRA1-209ENST00000529963 DNAJC14Q6Y2X3 702 aaPredicted RBP8□□□□□ -1.13
AMBRA1-209ENST00000529963 NLRP13Q86W25 1043 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 CNTN3Q9P232 1028 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8□□□□□ -1.13
AMBRA1-209ENST00000529963 PLEKHH2Q8IVE3 1493 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 SAMD9LQ8IVG5 1584 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 KIDINS220Q9ULH0 1771 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 SYCP2Q9BX26 1530 aa8□□□□□ -1.13
AMBRA1-209ENST00000529963 GPATCH8Q9UKJ3 1502 aaKnown RBP8□□□□□ -1.13
AMBRA1-209ENST00000529963 C3P01024 1663 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 CCNB3Q8WWL7 1395 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 ANKRD33BA6NCL7 494 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 NEURL1BA8MQ27 555 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 TOM1O60784 492 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 MMP20O60882 483 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 ORC1Q13415 861 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 ZNF468Q5VIY5 522 aaPredicted RBP7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 ASB16Q96NS5 453 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 CFDP1Q9UEE9 299 aaPredicted RBP7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 KIAA1107Q9UPP5 1409 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 MTUS2Q5JR59 1369 aa7.99□□□□□ -1.13
AMBRA1-209ENST00000529963 RPLP1P05386 114 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 HSPA1LP34931 641 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 HNRNPMP52272 730 aaKnown RBP eCLIP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 MLLT1Q03111 559 aaPredicted RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 PDE3BQ13370 1112 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 PDE12Q6L8Q7 609 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 ZSCAN29Q8IWY8 852 aaPredicted RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 C1orf127Q8N9H9 656 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 GGA1Q9UJY5 639 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 NSFL1CQ9UNZ2 370 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 NPATQ14207 1427 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 NCOA1Q15788 1441 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 TNFRSF21O75509 655 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 MAP2K3P46734 347 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 SRSF11Q05519 484 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 EHHADHQ08426 723 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 TTC39BQ5VTQ0 682 aaPredicted RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 ACDQ96AP0 544 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 CITED4Q96RK1 184 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 UBE2OQ9C0C9 1292 aaKnown RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 ABI2Q9NYB9 513 aaPredicted RBP7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 KANSL3Q9P2N6 904 aa7.98□□□□□ -1.13
AMBRA1-209ENST00000529963 ZMYM3Q14202 1370 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 ATP7AQ04656 1500 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 POLR3DP05423 398 aaPredicted RBP7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 USPL1Q5W0Q7 1092 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 XKR5Q6UX68 686 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 C1orf229Q6ZS94 237 aaPredicted RBP7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 HFE2Q6ZVN8 426 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 DHX32Q7L7V1 743 aaKnown RBP7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 FCHSD1Q86WN1 690 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 OXCT2Q9BYC2 517 aaPredicted RBP7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 C11orf16Q9NQ32 467 aa7.97□□□□□ -1.13
AMBRA1-209ENST00000529963 A2MP01023 1474 aa7.96□□□□□ -1.13
AMBRA1-209ENST00000529963 MROH2AA6NES4 1674 aa7.96□□□□□ -1.13
AMBRA1-209ENST00000529963 ZBTB42B2RXF5 422 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 ARAFP10398 606 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 MAPK8P45983 427 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 WHAMMQ8TF30 809 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 DMRTB1Q96MA1 342 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 NSUN5Q96P11 429 aaKnown RBP7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 SETDB2Q96T68 719 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 CHRDQ9H2X0 955 aa7.96□□□□□ -1.14
AMBRA1-209ENST00000529963 EREGO14944 169 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 TREHO43280 583 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 PHACTR2O75167 634 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 ADH6P28332 368 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 PIP4K2BP78356 416 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 PLCB3Q01970 1234 aa7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 DNAJB12Q9NXW2 375 aaKnown RBP7.95□□□□□ -1.14
AMBRA1-209ENST00000529963 TLR7Q9NYK1 1049 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms