RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 GNPATO15228 680 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 RPS6KB1P23443 525 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 FOXO4P98177 505 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 TOB2Q14106 344 aaPredicted RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 HSP90AA2PQ14568 343 aaPredicted RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 CSPP1Q1MSJ5 1256 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 LARP1BQ659C4 914 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 GIMAP6Q6P9H5 292 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 LMBR1LQ6UX01 489 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 CLEC4GQ6UXB4 293 aa18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 RTCBQ9Y3I0 505 aaKnown RBP18.73■□□□□ 0.59
TM9SF1-208ENST00000529332 TAF5LO75529 589 aa18.72■□□□□ 0.59
TM9SF1-208ENST00000529332 PTPN12Q05209 780 aaKnown RBP18.72■□□□□ 0.59
TM9SF1-208ENST00000529332 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
TM9SF1-208ENST00000529332 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
TM9SF1-208ENST00000529332 PLA2G12BQ9BX93 195 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 ALDH8A1Q9H2A2 487 aaPredicted RBP18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 TRMT112Q9UI30 125 aaKnown RBP18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 CHMP3Q9Y3E7 222 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 TFCP2Q12800 502 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 MPNDQ8N594 471 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 AK7Q96M32 723 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 NDUFB9Q9Y6M9 179 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
TM9SF1-208ENST00000529332 ADCY5O95622 1261 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 ATP5JP18859 108 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 TSGA10IPQ3SY00 556 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 FERMT3Q86UX7 667 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 UBE2Q2Q8WVN8 375 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 RGS17Q9UGC6 210 aaPredicted RBP18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 UBN2Q6ZU65 1347 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 C4AP0C0L4 1744 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 CHGBP05060 677 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 ANKRD1Q15327 319 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 USPL1Q5W0Q7 1092 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 FAM173BQ6P4H8 233 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 TTC6Q86TZ1 520 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 HMG20BQ9P0W2 317 aa18.7■□□□□ 0.58
TM9SF1-208ENST00000529332 LAMB2P55268 1798 aa18.69■□□□□ 0.58
TM9SF1-208ENST00000529332 HSP90B1P14625 803 aaKnown RBP18.69■□□□□ 0.58
TM9SF1-208ENST00000529332 NARFQ9UHQ1 456 aa18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 NIP7Q9Y221 180 aaKnown RBP eCLIP18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 UBR3Q6ZT12 1888 aa18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 KDM4AO75164 1064 aa18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 ZPR1O75312 459 aa18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 POTEAQ6S8J7 498 aa18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 ZNF830Q96NB3 372 aaPredicted RBP18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 UTP14AQ9BVJ6 771 aaKnown RBP18.68■□□□□ 0.58
TM9SF1-208ENST00000529332 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 KRT85P78386 507 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 STK3Q13188 491 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 LRRC4BQ9NT99 713 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 SH3TC1Q8TE82 1336 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 ZNF609O15014 1411 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 RGPD3A6NKT7 1758 aaPredicted RBP18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 ADRA2BP18089 450 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 PDCP20941 246 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 KIAA2012Q0VF49 1180 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 CCDC129Q6ZRS4 1044 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 RGPD4Q7Z3J3 1758 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 KLHL34Q8N239 644 aa18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 TNS1Q9HBL0 1735 aaKnown RBP18.67■□□□□ 0.58
TM9SF1-208ENST00000529332 EP400Q96L91 3159 aa18.66■□□□□ 0.58
TM9SF1-208ENST00000529332 AP5Z1O43299 807 aa18.66■□□□□ 0.58
TM9SF1-208ENST00000529332 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
TM9SF1-208ENST00000529332 CCDC57Q2TAC2 916 aa18.66■□□□□ 0.58
TM9SF1-208ENST00000529332 SEC62Q99442 399 aaKnown RBP18.66■□□□□ 0.58
TM9SF1-208ENST00000529332 ELP1O95163 1332 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 PDE8AO60658 829 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 SUSD4Q5VX71 490 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 DNAJC2Q99543 621 aaKnown RBP18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 COL24A1Q17RW2 1714 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 DDX60Q8IY21 1712 aaKnown RBP18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 PLSCR1O15162 318 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 CSF1RP07333 972 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 LIG1P18858 919 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 CTSWP56202 376 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 TRAPPC3LQ5T215 181 aa18.65■□□□□ 0.58
TM9SF1-208ENST00000529332 RFC4P35249 363 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 TXNRD1Q16881 649 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 HAUS7Q99871 368 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 RFX7Q2KHR2 1363 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 APBA3O96018 575 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 KRT32Q14532 448 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 ARHGEF1Q92888 912 aaKnown RBP18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 NEK1Q96PY6 1258 aa18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 TTC12Q9H892 705 aaPredicted RBP18.64■□□□□ 0.57
TM9SF1-208ENST00000529332 UQCRHLA0A096LP55 91 aa18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 JAK2O60674 1132 aa18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 NTSR2O95665 410 aa18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 UQCRHP07919 91 aa18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 IFIT5Q13325 482 aaKnown RBP18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 FBXO3Q9UK99 471 aa18.63■□□□□ 0.57
TM9SF1-208ENST00000529332 CYP21A2P08686 494 aa18.62■□□□□ 0.57
TM9SF1-208ENST00000529332 TAF7LQ5H9L4 462 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms