RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 GSPT1P15170 499 aaKnown RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 ZNF75DP51815 510 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 MKRN4PQ13434 485 aaPredicted RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 ZNF827Q17R98 1081 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 CASC1Q6TDU7 716 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 AKT1S1Q96B36 256 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 NUDT16Q96DE0 195 aaKnown RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
C11orf88-203ENST00000529167 WDR33Q9C0J8 1336 aaKnown RBP9.34□□□□□ -0.91
C11orf88-203ENST00000529167 PPIP5K1Q6PFW1 1433 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 USP27XA6NNY8 438 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 SASH3O75995 380 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 TPM1P09493 284 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 POLD1P28340 1107 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 LEKR1Q6ZMV7 388 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 ITPRIPQ8IWB1 547 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 NLGN2Q8NFZ4 835 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 RUNDC1Q96C34 613 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 FAXDC2Q96IV6 333 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 WDR17Q8IZU2 1322 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 A0A087WUV0 522 aaPredicted RBP9.33□□□□□ -0.92
C11orf88-203ENST00000529167 ARHGAP29Q52LW3 1261 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 TSHZ1Q6ZSZ6 1077 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 MSL3Q8N5Y2 521 aaKnown RBP9.33□□□□□ -0.92
C11orf88-203ENST00000529167 RTL1A6NKG5 1358 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 ERCC3P19447 782 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 CASTP20810 708 aaKnown RBP9.33□□□□□ -0.92
C11orf88-203ENST00000529167 PPP2R5AQ15172 486 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 ANKRD45Q5TZF3 282 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 INTS3Q68E01 1043 aaKnown RBP9.33□□□□□ -0.92
C11orf88-203ENST00000529167 GIMAP6Q6P9H5 292 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 CCAR2Q8N163 923 aaKnown RBP9.33□□□□□ -0.92
C11orf88-203ENST00000529167 IL17RAQ96F46 866 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 GDPD2Q9HCC8 539 aa9.33□□□□□ -0.92
C11orf88-203ENST00000529167 CICQ96RK0 1608 aaPredicted RBP9.32□□□□□ -0.92
C11orf88-203ENST00000529167 ZRSR1Q15695 479 aaKnown RBP9.32□□□□□ -0.92
C11orf88-203ENST00000529167 TADA2BQ86TJ2 420 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 MIEF2Q96C03 454 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 ACEP12821 1306 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 UTRNP46939 3433 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 WDR90Q96KV7 1748 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 SMC2O95347 1197 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 LMAN1P49257 510 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 CCDC158Q5M9N0 1113 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 FOXD4L5Q5VV16 416 aaPredicted RBP9.32□□□□□ -0.92
C11orf88-203ENST00000529167 TMEM57Q8N5G2 664 aa9.32□□□□□ -0.92
C11orf88-203ENST00000529167 FOXD4L4Q8WXT5 416 aaPredicted RBP9.32□□□□□ -0.92
C11orf88-203ENST00000529167 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.32□□□□□ -0.92
C11orf88-203ENST00000529167 IRX1P78414 480 aaPredicted RBP9.31□□□□□ -0.92
C11orf88-203ENST00000529167 TDRD7Q8NHU6 1098 aaKnown RBP9.31□□□□□ -0.92
C11orf88-203ENST00000529167 DNAAF4Q8WXU2 420 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 FAM210AQ96ND0 272 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 NKX1-1Q15270 411 aaPredicted RBP9.31□□□□□ -0.92
C11orf88-203ENST00000529167 CCDC144BQ3MJ40 725 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 CC2D1AQ6P1N0 951 aaPredicted RBP9.31□□□□□ -0.92
C11orf88-203ENST00000529167 CCDC144CPQ8IYA2 1237 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 ABTB2Q8N961 1025 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 PNPLA7Q6ZV29 1317 aa9.31□□□□□ -0.92
C11orf88-203ENST00000529167 USP8P40818 1118 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 SLC24A3Q9HC58 644 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 TTC22Q5TAA0 569 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 SARM1Q6SZW1 724 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 PLEKHM2Q8IWE5 1019 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 ARHGEF1Q92888 912 aaKnown RBP9.3□□□□□ -0.92
C11orf88-203ENST00000529167 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
C11orf88-203ENST00000529167 TRAK1Q9UPV9 953 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 EFCAB8A8MWE9 144 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 MAP2K7O14733 419 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 CCZ1BP86790 482 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 CCZ1P86791 482 aaPredicted RBP9.3□□□□□ -0.92
C11orf88-203ENST00000529167 TOM1L2Q6ZVM7 507 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 LRRN4CLQ8ND94 238 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 TATDN2Q93075 761 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 FUT8Q9BYC5 575 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 SRCIN1Q9C0H9 1055 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 FAM107BQ9H098 131 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 CLIP2Q9UDT6 1046 aa9.3□□□□□ -0.92
C11orf88-203ENST00000529167 USP6P35125 1406 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 CPSF1Q10570 1443 aaKnown RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 LY75O60449 1722 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 H0YHG0 523 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 KCNJ6P48051 423 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 SARNPP82979 210 aaKnown RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 SLC27A3Q5K4L6 730 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 COL13A1Q5TAT6 717 aaPredicted RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 ERC1Q8IUD2 1116 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 FAM177A1Q8N128 213 aaPredicted RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 UTP14AQ9BVJ6 771 aaKnown RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 LRRC4BQ9NT99 713 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 CCDC61Q9Y6R9 512 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 RGPD5Q99666 1765 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 SKILP12757 684 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 EIF5P55010 431 aaKnown RBP9.29□□□□□ -0.92
C11orf88-203ENST00000529167 DDR1Q08345 913 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 FOXR1Q6PIV2 292 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 DRC7Q8IY82 874 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 UBXN4Q92575 508 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 MRFAP1L1Q96HT8 127 aa9.29□□□□□ -0.92
C11orf88-203ENST00000529167 PDRG1Q9NUG6 133 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms