RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 ZNF165P49910 485 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 APOBRQ0VD83 1088 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 SNW1Q13573 536 aaKnown RBP9.84□□□□□ -0.83
CSTF3-208ENST00000528865 TPRNQ4KMQ1 711 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 DNTTIP2Q5QJE6 756 aaKnown RBP9.84□□□□□ -0.83
CSTF3-208ENST00000528865 CKAP2LQ8IYA6 745 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 BICD2Q8TD16 824 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 NEUROD6Q96NK8 337 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 CTNNA3Q9UI47 895 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 ABCC12Q96J65 1359 aa9.84□□□□□ -0.83
CSTF3-208ENST00000528865 MAST3O60307 1309 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 WDR19Q8NEZ3 1342 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 PCDH11XQ9BZA7 1347 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 PCDH11YQ9BZA8 1340 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 TNS2Q63HR2 1409 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 KCPQ6ZWJ8 1503 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 A0A1B0GUL7 405 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 A0A1W2PQ27 194 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 A0A1W2PQ64 194 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 A0A1W2PQD8 194 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 A1BGP04217 495 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 FDPSP14324 419 aaKnown RBP9.83□□□□□ -0.84
CSTF3-208ENST00000528865 PTGS1P23219 599 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 TCIRG1Q13488 830 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CHRNA2Q15822 529 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC186Q7Z3E2 898 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CCAR1Q8IX12 1150 aaKnown RBP9.83□□□□□ -0.84
CSTF3-208ENST00000528865 C17orf53Q8N3J3 647 aaPredicted RBP9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CABLES1Q8TDN4 633 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 DDX17Q92841 729 aaKnown RBP9.83□□□□□ -0.84
CSTF3-208ENST00000528865 LRRC2Q9BYS8 371 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 RTEL1Q9NZ71 1219 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CEP126Q9P2H0 1117 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 AKAP2Q9Y2D5 859 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 CHMP3Q9Y3E7 222 aa9.83□□□□□ -0.84
CSTF3-208ENST00000528865 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 NUP188Q5SRE5 1749 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 M0R2C6 588 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 CTIFO43310 598 aaKnown RBP9.82□□□□□ -0.84
CSTF3-208ENST00000528865 NEMFO60524 1076 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 FGD1P98174 961 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 STX1AQ16623 288 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 ILDR1Q86SU0 546 aaPredicted RBP9.82□□□□□ -0.84
CSTF3-208ENST00000528865 ZNF710Q8N1W2 664 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 SPC24Q8NBT2 197 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 OSBP2Q969R2 916 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 MRFAP1L1Q96HT8 127 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 ZNF512BQ96KM6 892 aaPredicted RBP9.82□□□□□ -0.84
CSTF3-208ENST00000528865 USP28Q96RU2 1077 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 CARD10Q9BWT7 1032 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 TRIM5Q9C035 493 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 DNAJC25Q9H1X3 360 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 UBR2Q8IWV8 1755 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 TJP1Q07157 1748 aa9.82□□□□□ -0.84
CSTF3-208ENST00000528865 A0A0G2JLW4 131 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 FOXP2O15409 715 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 PCCAP05165 728 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 RBM6P78332 1123 aaKnown RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 CCT2P78371 535 aaKnown RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 FAM160A1Q05DH4 1040 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 SYCP1Q15431 976 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 SLFNL1Q499Z3 407 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC158Q5M9N0 1113 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 ADALQ6DHV7 355 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 ZSCAN25Q6NSZ9 544 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 MB21D2Q8IYB1 491 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 ZNF594Q96JF6 807 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 TEX13AQ9BXU3 409 aaPredicted RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 PUS3Q9BZE2 481 aaKnown RBP9.81□□□□□ -0.84
CSTF3-208ENST00000528865 GOLPH3LQ9H4A5 285 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 KCND1Q9NSA2 647 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 ANO10Q9NW15 660 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 LAMA4Q16363 1823 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 PAPPAQ13219 1627 aa9.81□□□□□ -0.84
CSTF3-208ENST00000528865 YEATS4O95619 227 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 TTLL5Q6EMB2 1281 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC73Q6ZRK6 1079 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 FMR1NBQ8N0W7 255 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-208ENST00000528865 VSIG10Q8N0Z9 540 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 APPBP2Q92624 585 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 XAGE2Q96GT9 111 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 BPIFA3Q9BQP9 254 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC94Q9BW85 323 aaPredicted RBP9.8□□□□□ -0.84
CSTF3-208ENST00000528865 NRBP1Q9UHY1 535 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 HPS5Q9UPZ3 1129 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 CDHR2Q9BYE9 1310 aa9.8□□□□□ -0.84
CSTF3-208ENST00000528865 CARMIL3Q8ND23 1372 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 RIOK3O14730 519 aaKnown RBP9.79□□□□□ -0.84
CSTF3-208ENST00000528865 DHX16O60231 1041 aaKnown RBP9.79□□□□□ -0.84
CSTF3-208ENST00000528865 FGAP02671 866 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 IL2RBP14784 551 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 ADORA1P30542 326 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 IMMTQ16891 758 aaKnown RBP9.79□□□□□ -0.84
CSTF3-208ENST00000528865 CCDC57Q2TAC2 916 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 TTC39AQ5SRH9 613 aa9.79□□□□□ -0.84
CSTF3-208ENST00000528865 C11orf57Q6ZUT1 292 aaPredicted RBP9.79□□□□□ -0.84
CSTF3-208ENST00000528865 DHX40Q8IX18 779 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms