RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 MCM2P49736 904 aa14.25□□□□□ -0.13
USF1-208ENST00000528768 AIMP1Q12904 312 aaKnown RBP14.25□□□□□ -0.13
USF1-208ENST00000528768 VPS33BQ9H267 617 aa14.25□□□□□ -0.13
USF1-208ENST00000528768 ADARB2Q9NS39 739 aaKnown RBP14.25□□□□□ -0.13
USF1-208ENST00000528768 DDX11L8A8MPP1 907 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
USF1-208ENST00000528768 G3BP1Q13283 466 aaKnown RBP eCLIP14.24□□□□□ -0.13
USF1-208ENST00000528768 LARGE2Q8N3Y3 721 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 SPRYD3Q8NCJ5 442 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 ZC3H15Q8WU90 426 aaKnown RBP14.24□□□□□ -0.13
USF1-208ENST00000528768 GBP4Q96PP9 640 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 KIF2CQ99661 725 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 ESYT1Q9BSJ8 1104 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 METTL22Q9BUU2 404 aaPredicted RBP14.24□□□□□ -0.13
USF1-208ENST00000528768 SNED1Q8TER0 1413 aa14.24□□□□□ -0.13
USF1-208ENST00000528768 CDHR2Q9BYE9 1310 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 TRAF5O00463 557 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 GLRX3O76003 335 aaKnown RBP14.23□□□□□ -0.13
USF1-208ENST00000528768 CELF2O95319 508 aaKnown RBP14.23□□□□□ -0.13
USF1-208ENST00000528768 IFIT2P09913 472 aaKnown RBP14.23□□□□□ -0.13
USF1-208ENST00000528768 ANAPC15P60006 121 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 CRY2Q49AN0 593 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 OLFM4Q6UX06 510 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 ANKRD13DQ6ZTN6 518 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 RUFY2Q8WXA3 655 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 NYXQ9GZU5 481 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 NIP7Q9Y221 180 aaKnown RBP eCLIP14.23□□□□□ -0.13
USF1-208ENST00000528768 CASP8AP2Q9UKL3 1982 aa14.23□□□□□ -0.13
USF1-208ENST00000528768 MYL6BP14649 208 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 CHMLP26374 656 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 FMR1Q06787 632 aaKnown RBP eCLIP14.22□□□□□ -0.13
USF1-208ENST00000528768 PDIA6Q15084 440 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 CIAPIN1Q6FI81 312 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 NIM1KQ8IY84 436 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 TMX4Q9H1E5 349 aaPredicted RBP14.22□□□□□ -0.13
USF1-208ENST00000528768 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
USF1-208ENST00000528768 IL1RAPL2Q9NP60 686 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 GPRC5DQ9NZD1 345 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 PGAP2Q9UHJ9 254 aa14.22□□□□□ -0.13
USF1-208ENST00000528768 KIAA1211Q6ZU35 1233 aa14.21□□□□□ -0.13
USF1-208ENST00000528768 NUTM1Q86Y26 1132 aa14.21□□□□□ -0.13
USF1-208ENST00000528768 PRAMEF22A3QJZ6 481 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 NEURL1BA8MQ27 555 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 HIP1O00291 1037 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 HOXA10P31260 410 aaPredicted RBP14.2□□□□□ -0.14
USF1-208ENST00000528768 MCM4P33991 863 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 CWF19L2Q2TBE0 894 aaKnown RBP14.2□□□□□ -0.14
USF1-208ENST00000528768 CDC37L1Q7L3B6 337 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 PLBD2Q8NHP8 589 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 MYD88Q99836 296 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 ECHDC1Q9NTX5 307 aa14.2□□□□□ -0.14
USF1-208ENST00000528768 RIC1Q4ADV7 1423 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 NUCB2P80303 420 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 GCKRQ14397 625 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 RPGRQ92834 1020 aaKnown RBP14.19□□□□□ -0.14
USF1-208ENST00000528768 SUCLG2Q96I99 432 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 ANO2Q9NQ90 1003 aa14.19□□□□□ -0.14
USF1-208ENST00000528768 SUPT20HQ8NEM7 779 aa14.18□□□□□ -0.14
USF1-208ENST00000528768 CCDC102AQ96A19 550 aa14.18□□□□□ -0.14
USF1-208ENST00000528768 CRAMP1Q96RY5 1269 aa14.18□□□□□ -0.14
USF1-208ENST00000528768 USP16Q9Y5T5 823 aa14.18□□□□□ -0.14
USF1-208ENST00000528768 PPIP5K2O43314 1243 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 DDIT3P35638 169 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 SOX10P56693 466 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 SKOR2Q2VWA4 1001 aaPredicted RBP14.17□□□□□ -0.14
USF1-208ENST00000528768 PI4K2BQ8TCG2 481 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 RBM17Q96I25 401 aaKnown RBP14.17□□□□□ -0.14
USF1-208ENST00000528768 GLIS2Q9BZE0 524 aaPredicted RBP14.17□□□□□ -0.14
USF1-208ENST00000528768 BICC1Q9H694 974 aaKnown RBP14.17□□□□□ -0.14
USF1-208ENST00000528768 DIAPH3Q9NSV4 1193 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 ZNRF3Q9ULT6 936 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 COL4A5P29400 1685 aa14.17□□□□□ -0.14
USF1-208ENST00000528768 IGKV5-2P06315 115 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 HUNKP57058 714 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 TNIP1Q15025 636 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 RAB3GAP1Q15042 981 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 AACSQ86V21 672 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
USF1-208ENST00000528768 NBPF15Q8N660 670 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 EVI5LQ96CN4 794 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 LAMB4A4D0S4 1761 aa14.16□□□□□ -0.14
USF1-208ENST00000528768 FAM177BA6PVY3 158 aa14.15□□□□□ -0.14
USF1-208ENST00000528768 ERVV-1B6SEH8 477 aa14.15□□□□□ -0.14
USF1-208ENST00000528768 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
USF1-208ENST00000528768 L1TD1Q5T7N2 865 aaKnown RBP14.15□□□□□ -0.14
USF1-208ENST00000528768 CTU1Q7Z7A3 348 aaKnown RBP14.15□□□□□ -0.14
USF1-208ENST00000528768 IL17RAQ96F46 866 aa14.15□□□□□ -0.14
USF1-208ENST00000528768 ZNF408Q9H9D4 720 aa14.15□□□□□ -0.14
USF1-208ENST00000528768 GMPSP49915 693 aaPredicted RBP14.14□□□□□ -0.15
USF1-208ENST00000528768 CXCL9Q07325 125 aa14.14□□□□□ -0.15
USF1-208ENST00000528768 PKN2Q16513 984 aaKnown RBP14.14□□□□□ -0.15
USF1-208ENST00000528768 RGMBQ6NW40 437 aa14.14□□□□□ -0.15
USF1-208ENST00000528768 COPRSQ9NQ92 184 aa14.14□□□□□ -0.15
USF1-208ENST00000528768 SGSM2O43147 1006 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms