RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MROH5Q6ZUA9 1318 aa21.06■□□□□ 0.96
HIF3A-211ENST00000528563 RLBP1P12271 317 aa21.06■□□□□ 0.96
HIF3A-211ENST00000528563 RPS12P25398 132 aaKnown RBP21.06■□□□□ 0.96
HIF3A-211ENST00000528563 USP50Q70EL3 339 aaPredicted RBP21.06■□□□□ 0.96
HIF3A-211ENST00000528563 ADARB2Q9NS39 739 aaKnown RBP21.06■□□□□ 0.96
HIF3A-211ENST00000528563 USP17L3A6NCW0 530 aa21.05■□□□□ 0.96
HIF3A-211ENST00000528563 USP17L4A6NCW7 530 aa21.05■□□□□ 0.96
HIF3A-211ENST00000528563 UBE4AQ14139 1066 aa21.05■□□□□ 0.96
HIF3A-211ENST00000528563 USP17L1Q7RTZ2 530 aa21.05■□□□□ 0.96
HIF3A-211ENST00000528563 SHTN1A0MZ66 631 aa21.04■□□□□ 0.96
HIF3A-211ENST00000528563 GMLQ99445 158 aa21.04■□□□□ 0.96
HIF3A-211ENST00000528563 RCAN3Q9UKA8 241 aa21.04■□□□□ 0.96
HIF3A-211ENST00000528563 CLEC11AQ9Y240 323 aa21.04■□□□□ 0.96
HIF3A-211ENST00000528563 H7C1D1 291 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 EYA2O00167 538 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 ITGBL1O95965 494 aaPredicted RBP21.03■□□□□ 0.96
HIF3A-211ENST00000528563 MTX1Q13505 466 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 RSBN1LQ6PCB5 846 aaPredicted RBP21.03■□□□□ 0.96
HIF3A-211ENST00000528563 MICALL2Q8IY33 904 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
HIF3A-211ENST00000528563 VGLL2Q8N8G2 317 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 CD209Q9NNX6 404 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 A0A1B0GUL6 1792 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 ADAMTSL1Q8N6G6 1762 aa21.03■□□□□ 0.96
HIF3A-211ENST00000528563 PDE8BO95263 885 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 GNAI2P04899 355 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 APLP1P51693 650 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 HIRAP54198 1017 aaPredicted RBP21.02■□□□□ 0.96
HIF3A-211ENST00000528563 ATG9AQ7Z3C6 839 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 AGBL3Q8NEM8 1001 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 FBXO3Q9UK99 471 aa21.02■□□□□ 0.96
HIF3A-211ENST00000528563 ZNF609O15014 1411 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 ZBTB7BO15156 539 aaPredicted RBP21.01■□□□□ 0.95
HIF3A-211ENST00000528563 METTL24Q5JXM2 366 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 DACT2Q5SW24 774 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 STRIP1Q5VSL9 837 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 PGAP2Q9UHJ9 254 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 IL1R1P14778 569 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 MAP1SQ66K74 1059 aaPredicted RBP21.01■□□□□ 0.95
HIF3A-211ENST00000528563 CNTROBQ8N137 903 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 COPRSQ9NQ92 184 aa21.01■□□□□ 0.95
HIF3A-211ENST00000528563 CIAO1O76071 339 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 TTLL5Q6EMB2 1281 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 SAMD7Q7Z3H4 446 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 ZNF804AQ7Z570 1209 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 TRPM4Q8TD43 1214 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 PANK1Q8TE04 598 aa21■□□□□ 0.95
HIF3A-211ENST00000528563 FAM84BQ96KN1 310 aaPredicted RBP21■□□□□ 0.95
HIF3A-211ENST00000528563 PSME4Q14997 1843 aa20.99■□□□□ 0.95
HIF3A-211ENST00000528563 ZNF280AP59817 542 aaPredicted RBP20.99■□□□□ 0.95
HIF3A-211ENST00000528563 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
HIF3A-211ENST00000528563 ZC3H15Q8WU90 426 aaKnown RBP20.99■□□□□ 0.95
HIF3A-211ENST00000528563 PASKQ96RG2 1323 aa20.99■□□□□ 0.95
HIF3A-211ENST00000528563 SRGAP3O43295 1099 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 EGFRP00533 1210 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 MS4A1P11836 297 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 FGFR2P21802 821 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 GTF2IP78347 998 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 MXD3Q9BW11 206 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 SIL1Q9H173 461 aa20.98■□□□□ 0.95
HIF3A-211ENST00000528563 PA2G4Q9UQ80 394 aaKnown RBP20.98■□□□□ 0.95
HIF3A-211ENST00000528563 USP17L8P0C7I0 530 aa20.97■□□□□ 0.95
HIF3A-211ENST00000528563 HIBADHP31937 336 aaKnown RBP20.97■□□□□ 0.95
HIF3A-211ENST00000528563 GYG1P46976 350 aa20.97■□□□□ 0.95
HIF3A-211ENST00000528563 FBXO33Q7Z6M2 555 aa20.97■□□□□ 0.95
HIF3A-211ENST00000528563 TDRD7Q8NHU6 1098 aaKnown RBP20.97■□□□□ 0.95
HIF3A-211ENST00000528563 CEP350Q5VT06 3117 aa20.97■□□□□ 0.95
HIF3A-211ENST00000528563 SASH1O94885 1247 aa20.96■□□□□ 0.95
HIF3A-211ENST00000528563 TBC1D10BQ4KMP7 808 aaPredicted RBP20.96■□□□□ 0.95
HIF3A-211ENST00000528563 PNMA6EA0A0J9YXQ4 647 aa20.95■□□□□ 0.94
HIF3A-211ENST00000528563 IL15P40933 162 aaPredicted RBP20.95■□□□□ 0.94
HIF3A-211ENST00000528563 PUM3Q15397 648 aaKnown RBP20.95■□□□□ 0.94
HIF3A-211ENST00000528563 DNAJC5GQ8N7S2 189 aa20.95■□□□□ 0.94
HIF3A-211ENST00000528563 CEP126Q9P2H0 1117 aa20.95■□□□□ 0.94
HIF3A-211ENST00000528563 MYO3BQ8WXR4 1341 aa20.95■□□□□ 0.94
HIF3A-211ENST00000528563 HTRA3P83110 453 aa20.94■□□□□ 0.94
HIF3A-211ENST00000528563 ATP8B2P98198 1209 aa20.94■□□□□ 0.94
HIF3A-211ENST00000528563 RBM26Q5T8P6 1007 aaKnown RBP20.94■□□□□ 0.94
HIF3A-211ENST00000528563 FBXW7Q969H0 707 aa20.94■□□□□ 0.94
HIF3A-211ENST00000528563 ZNF646O15015 1829 aaPredicted RBP20.94■□□□□ 0.94
HIF3A-211ENST00000528563 FAM205AQ6ZU69 1335 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 IFIT1P09914 478 aaKnown RBP20.93■□□□□ 0.94
HIF3A-211ENST00000528563 MMP14P50281 582 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 KIF4BQ2VIQ3 1234 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 CAVIN4Q5BKX8 364 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 CERS5Q8N5B7 392 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 LPIN2Q92539 896 aa20.93■□□□□ 0.94
HIF3A-211ENST00000528563 YTHDC1Q96MU7 727 aaKnown RBP20.93■□□□□ 0.94
HIF3A-211ENST00000528563 BCAMP50895 628 aa20.92■□□□□ 0.94
HIF3A-211ENST00000528563 FKBP1AP62942 108 aaKnown RBP20.92■□□□□ 0.94
HIF3A-211ENST00000528563 POLA2Q14181 598 aa20.92■□□□□ 0.94
HIF3A-211ENST00000528563 C1orf115Q9H7X2 142 aa20.92■□□□□ 0.94
HIF3A-211ENST00000528563 MYOZ2Q9NPC6 264 aa20.92■□□□□ 0.94
HIF3A-211ENST00000528563 MVPQ14764 893 aaKnown RBP20.91■□□□□ 0.94
HIF3A-211ENST00000528563 OGFOD1Q8N543 542 aa20.91■□□□□ 0.94
HIF3A-211ENST00000528563 SSH3Q8TE77 659 aa20.91■□□□□ 0.94
HIF3A-211ENST00000528563 SLC5A1P13866 664 aa20.9■□□□□ 0.94
HIF3A-211ENST00000528563 FMR1Q06787 632 aaKnown RBP eCLIP20.9■□□□□ 0.94
HIF3A-211ENST00000528563 PDE3AQ14432 1141 aa20.9■□□□□ 0.94
HIF3A-211ENST00000528563 CDC37L1Q7L3B6 337 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms