RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 MARCKSP29966 332 aaPredicted RBP20.69■□□□□ 0.9
LTBP3-210ENST00000528516 AOPEPQ8N6M6 819 aa20.69■□□□□ 0.9
LTBP3-210ENST00000528516 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 CREB3L3Q68CJ9 461 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 LEO1Q8WVC0 666 aaPredicted RBP20.68■□□□□ 0.9
LTBP3-210ENST00000528516 TPM1P09493 284 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 APOBRQ0VD83 1088 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 TFCP2Q12800 502 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
LTBP3-210ENST00000528516 LEKR1Q6ZMV7 388 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 NOC3LQ8WTT2 800 aaKnown RBP20.68■□□□□ 0.9
LTBP3-210ENST00000528516 AIDAQ96BJ3 306 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 STX1AQ16623 288 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 ADCK5Q3MIX3 580 aa20.68■□□□□ 0.9
LTBP3-210ENST00000528516 OAS2P29728 719 aaKnown RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 NOM1Q5C9Z4 860 aaKnown RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 ZNF446Q9NWS9 450 aa20.67■□□□□ 0.9
LTBP3-210ENST00000528516 RAI14Q9P0K7 980 aa20.67■□□□□ 0.9
LTBP3-210ENST00000528516 CCAR1Q8IX12 1150 aaKnown RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 ZNF594Q96JF6 807 aaPredicted RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 SSH2Q76I76 1423 aa20.67■□□□□ 0.9
LTBP3-210ENST00000528516 ADAMTS13Q76LX8 1427 aa20.67■□□□□ 0.9
LTBP3-210ENST00000528516 TRIM66O15016 1216 aa20.67■□□□□ 0.9
LTBP3-210ENST00000528516 DHX8Q14562 1220 aaKnown RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 ORC3Q9UBD5 711 aaPredicted RBP20.67■□□□□ 0.9
LTBP3-210ENST00000528516 FLT4P35916 1363 aa20.66■□□□□ 0.9
LTBP3-210ENST00000528516 ZSWIM4Q9H7M6 989 aa20.66■□□□□ 0.9
LTBP3-210ENST00000528516 C11orf57Q6ZUT1 292 aaPredicted RBP20.66■□□□□ 0.9
LTBP3-210ENST00000528516 GSDMDP57764 484 aa20.66■□□□□ 0.9
LTBP3-210ENST00000528516 GPATCH11Q8N954 259 aa20.66■□□□□ 0.9
LTBP3-210ENST00000528516 TTC14Q96N46 770 aa20.66■□□□□ 0.9
LTBP3-210ENST00000528516 TRMT112Q9UI30 125 aaKnown RBP20.66■□□□□ 0.9
LTBP3-210ENST00000528516 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.66■□□□□ 0.9
LTBP3-210ENST00000528516 ADAMTS2O95450 1211 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
LTBP3-210ENST00000528516 GYS2P54840 703 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 PTH1RQ03431 593 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 IFIT5Q13325 482 aaKnown RBP20.65■□□□□ 0.9
LTBP3-210ENST00000528516 SLFNL1Q499Z3 407 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 DBNDD2Q9BQY9 259 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 NAP1L1P55209 391 aaKnown RBP20.65■□□□□ 0.9
LTBP3-210ENST00000528516 ST5P78524 1137 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 SLC20A2Q08357 652 aa20.65■□□□□ 0.9
LTBP3-210ENST00000528516 ATP2B2Q01814 1243 aa20.64■□□□□ 0.9
LTBP3-210ENST00000528516 SEC62Q99442 399 aaKnown RBP20.64■□□□□ 0.9
LTBP3-210ENST00000528516 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.91e-6■■■■■ 34.2
LTBP3-210ENST00000528516 ANO10Q9NW15 660 aa20.64■□□□□ 0.9
LTBP3-210ENST00000528516 LRRC7Q96NW7 1537 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 ZNF213O14771 459 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 JAK2O60674 1132 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 SIRT1Q96EB6 747 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 CARD6Q9BX69 1037 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 TULP2O00295 520 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 FAM193AP78312 1265 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 SMARCE1Q969G3 411 aa20.64■□□□□ 0.89
LTBP3-210ENST00000528516 PROSER3Q2NL68 480 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 LRRN4CLQ8ND94 238 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 LINS1Q8NG48 757 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 LSG1Q9H089 658 aaKnown RBP20.63■□□□□ 0.89
LTBP3-210ENST00000528516 HOOK1Q9UJC3 728 aaKnown RBP20.63■□□□□ 0.89
LTBP3-210ENST00000528516 MYO1CO00159 1063 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 CAVIN2O95810 425 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
LTBP3-210ENST00000528516 MYO3AQ8NEV4 1616 aa20.63■□□□□ 0.89
LTBP3-210ENST00000528516 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 NYAP1Q6ZVC0 841 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 IFNL2Q8IZJ0 200 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 MRFAP1L1Q96HT8 127 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 FHOD1Q9Y613 1164 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 TRIM22Q8IYM9 498 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 SUCLG2Q96I99 432 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 TPCN1Q9ULQ1 816 aa20.62■□□□□ 0.89
LTBP3-210ENST00000528516 IPO7O95373 1038 aaKnown RBP20.61■□□□□ 0.89
LTBP3-210ENST00000528516 PLA2G4AP47712 749 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 EPC1Q9H2F5 836 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 PTPRUQ92729 1446 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 EVCP57679 992 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 SMC1AQ14683 1233 aaKnown RBP20.61■□□□□ 0.89
LTBP3-210ENST00000528516 SNRPA1P09661 255 aaKnown RBP20.61■□□□□ 0.89
LTBP3-210ENST00000528516 UBAC1Q9BSL1 405 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 NAPBQ9H115 298 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
LTBP3-210ENST00000528516 LMOD1P29536 600 aaPredicted RBP20.6■□□□□ 0.89
LTBP3-210ENST00000528516 IFNKQ9P0W0 207 aa20.6■□□□□ 0.89
LTBP3-210ENST00000528516 PLEKHG3A1L390 1219 aa20.6■□□□□ 0.89
LTBP3-210ENST00000528516 PPP1R13BQ96KQ4 1090 aa20.6■□□□□ 0.89
LTBP3-210ENST00000528516 ARFGAP3Q9NP61 516 aa20.6■□□□□ 0.89
LTBP3-210ENST00000528516 RANBP6O60518 1105 aaKnown RBP20.59■□□□□ 0.89
LTBP3-210ENST00000528516 FAM89AQ96GI7 184 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 IFIT3O14879 490 aaKnown RBP20.59■□□□□ 0.89
LTBP3-210ENST00000528516 A1BGP04217 495 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 CDC25BP30305 580 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 AKAP4Q5JQC9 854 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 CD163L1Q9NR16 1453 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 CCZ1BP86790 482 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 CCZ1P86791 482 aaPredicted RBP20.59■□□□□ 0.89
LTBP3-210ENST00000528516 STAP2Q9UGK3 403 aa20.59■□□□□ 0.89
LTBP3-210ENST00000528516 CASQ1P31415 396 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms