RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 SCARF1Q14162 830 aa9.26□□□□□ -0.93
SOX6-211ENST00000528429 KBTBD3Q8NAB2 608 aa9.26□□□□□ -0.93
SOX6-211ENST00000528429 SEC62Q99442 399 aaKnown RBP9.26□□□□□ -0.93
SOX6-211ENST00000528429 NYXQ9GZU5 481 aa9.26□□□□□ -0.93
SOX6-211ENST00000528429 APBA3O96018 575 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 TXNRD1Q16881 649 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 TPTE2Q6XPS3 522 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 ZNF589Q86UQ0 364 aaPredicted RBP9.25□□□□□ -0.93
SOX6-211ENST00000528429 CDC5LQ99459 802 aaKnown RBP9.25□□□□□ -0.93
SOX6-211ENST00000528429 SBF2Q86WG5 1849 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 HSPA4P34932 840 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 PUM3Q15397 648 aaKnown RBP9.25□□□□□ -0.93
SOX6-211ENST00000528429 SLC27A3Q5K4L6 730 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 PRPF40BQ6NWY9 871 aaKnown RBP9.25□□□□□ -0.93
SOX6-211ENST00000528429 CCDC129Q6ZRS4 1044 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 VGLL2Q8N8G2 317 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 NLRP3Q96P20 1036 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 CCDC171Q6TFL3 1326 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 MROH5Q6ZUA9 1318 aa9.25□□□□□ -0.93
SOX6-211ENST00000528429 ZNF831Q5JPB2 1677 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 CLGNO14967 610 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 ZAP70P43403 619 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 PHKA1P46020 1223 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 NFIXQ14938 502 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 ANKRD18AQ8IVF6 992 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 GPATCH11Q8N954 259 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 C4BP0C0L5 1744 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 MYH3P11055 1940 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 CHRNDQ07001 517 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 CC2D2BQ6DHV5 1058 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 BRWD3Q6RI45 1802 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 RASEFQ8IZ41 740 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 PROM2Q8N271 834 aa9.24□□□□□ -0.93
SOX6-211ENST00000528429 RBM8AQ9Y5S9 174 aaKnown RBP9.24□□□□□ -0.93
SOX6-211ENST00000528429 SLC5A1P13866 664 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 FAM177A1Q8N128 213 aaPredicted RBP9.23□□□□□ -0.93
SOX6-211ENST00000528429 LPIN2Q92539 896 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 CELF1Q92879 486 aaKnown RBP9.23□□□□□ -0.93
SOX6-211ENST00000528429 TFCP2L1Q9NZI6 479 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 SNX14Q9Y5W7 946 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 KDM4AO75164 1064 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 MCAMP43121 646 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 SF3B3Q15393 1217 aaKnown RBP9.23□□□□□ -0.93
SOX6-211ENST00000528429 WASHC4Q2M389 1173 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 CCDC102BQ68D86 513 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 CNBD1Q8NA66 436 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 BCORQ6W2J9 1755 aa9.23□□□□□ -0.93
SOX6-211ENST00000528429 LY75O60449 1722 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 CPA1P15085 419 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 MCMDC2Q4G0Z9 681 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 IQSEC3Q9UPP2 1182 aaPredicted RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 CARMIL3Q8ND23 1372 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 WTIPA6NIX2 430 aaPredicted RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 RGL2O15211 777 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 IDH1O75874 414 aaKnown RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 GYS1P13807 737 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 ZKSCAN1P17029 563 aaPredicted RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 IRX3P78415 501 aaPredicted RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 JAKMIP1Q96N16 626 aaKnown RBP9.22□□□□□ -0.93
SOX6-211ENST00000528429 RTL9Q8NET4 1388 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 MED23Q9ULK4 1368 aa9.22□□□□□ -0.93
SOX6-211ENST00000528429 EPB41L2O43491 1005 aaKnown RBP9.21□□□□□ -0.93
SOX6-211ENST00000528429 APPP05067 770 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 CASTP20810 708 aaKnown RBP9.21□□□□□ -0.93
SOX6-211ENST00000528429 SSFA2P28290 1259 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 BCAMP50895 628 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 SLC10A5Q5PT55 438 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 CREB3L3Q68CJ9 461 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 POTEAQ6S8J7 498 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 MAP4K1Q92918 833 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 LARP6Q9BRS8 491 aaKnown RBP9.21□□□□□ -0.93
SOX6-211ENST00000528429 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.93
SOX6-211ENST00000528429 DDX60Q8IY21 1712 aaKnown RBP9.21□□□□□ -0.94
SOX6-211ENST00000528429 RNF113AO15541 343 aaKnown RBP9.21□□□□□ -0.94
SOX6-211ENST00000528429 FGFR2P21802 821 aa9.21□□□□□ -0.94
SOX6-211ENST00000528429 RPS8P62241 208 aaKnown RBP9.21□□□□□ -0.94
SOX6-211ENST00000528429 NFKBIBQ15653 356 aa9.21□□□□□ -0.94
SOX6-211ENST00000528429 ADCK5Q3MIX3 580 aa9.21□□□□□ -0.94
SOX6-211ENST00000528429 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.21□□□□□ -0.94
SOX6-211ENST00000528429 CHMP5Q9NZZ3 219 aa9.21□□□□□ -0.94
SOX6-211ENST00000528429 NECTIN1Q15223 517 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 ZNF827Q17R98 1081 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 ZMYM1Q5SVZ6 1142 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 RGS17Q9UGC6 210 aaPredicted RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 MINPP1Q9UNW1 487 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 MAST3O60307 1309 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 SLC27A2O14975 620 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 FRAT2O75474 233 aaPredicted RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 NPM3O75607 178 aaKnown RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 CYP2E1P05181 493 aaPredicted RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 UQCRFS1P1P0C7P4 283 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 RASGRF1Q13972 1273 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 LRRFIP1Q32MZ4 808 aaKnown RBP9.2□□□□□ -0.94
SOX6-211ENST00000528429 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 RNF20Q5VTR2 975 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 PRR5LQ6MZQ0 368 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 TAF6LQ9Y6J9 622 aa9.2□□□□□ -0.94
SOX6-211ENST00000528429 RFX7Q2KHR2 1363 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms